RNA id: TCONS_00015925


Basic Information

Item Value
RNA id TCONS_00015925
length 117
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_008185
representative True

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 52049158 ~ 52049274 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGCCacagtcatatcaccctgcagcccaacacCGGTTACttactaaagctaagcagggctgagcctggccagtacctgtatgggagaccactagggaacactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120440

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00016093 lncRNA downstream 145520 51903159 ~ 51903638 (-) True XLOC_008184
TCONS_00016532 lncRNA downstream 211771 51826078 ~ 51837387 (-) True XLOC_008182
TCONS_00016092 lncRNA downstream 429700 51611220 ~ 51619458 (-) True XLOC_008179
TCONS_00016531 lncRNA downstream 1062552 50972410 ~ 50986606 (-) False XLOC_008176
TCONS_00016530 lncRNA downstream 1062552 50972410 ~ 50986606 (-) True XLOC_008176
TCONS_00016094 lncRNA upstream 140603 52189877 ~ 52191692 (-) True XLOC_008186
TCONS_00016533 lncRNA upstream 348959 52398233 ~ 52408817 (-) False XLOC_008187
TCONS_00016534 lncRNA upstream 526689 52575963 ~ 52576704 (-) True XLOC_008192
TCONS_00015924 mRNA downstream 194111 51829317 ~ 51855047 (-) True XLOC_008183
TCONS_00015921 mRNA downstream 429770 51164056 ~ 51619388 (-) False XLOC_008179
TCONS_00015920 mRNA downstream 1009456 51023954 ~ 51039702 (-) True XLOC_008178
TCONS_00015919 mRNA downstream 1034866 50994138 ~ 51014292 (-) True XLOC_008177
TCONS_00015918 mRNA downstream 1156716 50839282 ~ 50892442 (-) True XLOC_008175
TCONS_00015926 mRNA upstream 328283 52377557 ~ 52408307 (-) False XLOC_008187
TCONS_00015927 mRNA upstream 346152 52395426 ~ 52408385 (-) False XLOC_008187
TCONS_00015929 mRNA upstream 350503 52399777 ~ 52408396 (-) False XLOC_008187
TCONS_00015931 mRNA upstream 368973 52418247 ~ 52433292 (-) True XLOC_008188
TCONS_00015932 mRNA upstream 427246 52476520 ~ 52480661 (-) False XLOC_008189
TCONS_00015923 other downstream 295961 51753080 ~ 51753197 (-) True XLOC_008181
TCONS_00015922 other downstream 775858 51273185 ~ 51273300 (-) True XLOC_008180
TCONS_00015911 other downstream 2294208 49754834 ~ 49754950 (-) True XLOC_008166
TCONS_00015906 other downstream 2999270 49040191 ~ 49049888 (-) True XLOC_008156
TCONS_00015898 other downstream 3472458 48576584 ~ 48576700 (-) True XLOC_008146
TCONS_00015928 other upstream 348959 52398233 ~ 52405708 (-) False XLOC_008187
TCONS_00015930 other upstream 356481 52405755 ~ 52408817 (-) True XLOC_008187
TCONS_00015933 other upstream 427407 52476681 ~ 52478944 (-) True XLOC_008189