RNA id: TCONS_00015934


Basic Information

Item Value
RNA id TCONS_00015934
length 1257
RNA type mRNA
GC content 0.58
exon number 1
gene id XLOC_008190
representative True

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 52520204 ~ 52521460 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGATAAGCCAGCATCAGTGAACATCAGCTCGGGGAACAGCTCCGTGGACAGACGCTCGTTCCTGGAGAGCAGTGGATACCAGCACCTGGAGCCCGGAGAGCTGCGGGTGCTGATCCCGGTGCTGCTGGGGGTCATCTGTGTTCTTGGCTTCAGCGGGAACGTGACGGCTATGGGTGTCCTGATCACCAACGCACGCAAGAGTAAACTGTCCCTAATCAACGGGCTCATCCTGAACCTGATGATGGCTGACGGTCTGGTGCTGGCGTTCACGGTTCCCTTCAGAGCGGCGGCGTACTCACGGGCCAGCTGGACACTGGGGCTGTTCATCTGCAAGACCTGCGACTGGTTCCTGCACTCCTGCATGGCCGCCAAGAGCTTCACTGTCGCCATCATGGCTAAAGCCTGCTACAGGTACGTCAGCAACCCTACCAAACAGGTGAGCATCCGCATGAAGACCATCCTGGTGGTGCTGATGCTGGCATGGCTGCTGGCTTGTGTGTTGCCCCTTCCCCAATGGCTCTTCTCCAAACTCCAGAAGGAACCCAATGGGATGGTGTGTGTTCAGATGGTGCCACTCCATGCCCATAACTTCATGTCAATATATGTGAAGGCGTACCCGCTCCTAGCCTACTGTATGCCGCTAAGCGTCGCTCTTCTTTACTTCTGGAAGGCGTACGGGAGATGCCAGAGGAGGTCAAGCAAGACGCAGAACCTGCGGACTCAGATCCGTTCTCGAAAGTTAACGCTAATGCTGTTTAGCTTGACTGTAGCCATGGCTAGCATGTGGCTCCCGCAGTGGGTGTCGTGGGTGTGGATGCGGCACGCGGTGGAGACGGGTGGAGGGTTCCCTCCAGTGCTCTTCAGTCTGTCAGCGCAGATACTGATGTTCTCCATCTCGCTAATAAACCCGCTCATCGTCCTGTCTCTCTCCGAGGAGTTCCGCGAGGGCTACATCGATTTATGGCGGAGGCTCACTCTTCGTAAACAACCACCGAAGAACAAGCCAGGACCGCACACCCCGACTGCCCCCAAATCGCCCACTCCACGCCAAGAGACGGCTGACCTGCCTCCACAGCGGGCAGAGCAGCCGGAGACCCCGCCGGACGCCGCACCGCAGGACAGTCCCAACAATAAAGACGGGATAGTTCTGCAGGATGTGGAGCAGTTCTGGCAGGAGCGGGAGACGGGCTCCCAGAGCCAGGAGAACGACCCCATCCCCTGGGAACACCAGGAGCCCAAAGGGGGACAACAGTAA

Function

GO: NA

KEGG:

id description
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-050128-2 Orthologous to human GPR151 (G protein-coupled receptor 151).

Ensembl:

ensembl_id ENSDART00000172110

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00016533 lncRNA downstream 111387 52398233 ~ 52408817 (-) False XLOC_008187
TCONS_00016094 lncRNA downstream 328512 52189877 ~ 52191692 (-) True XLOC_008186
TCONS_00016093 lncRNA downstream 616566 51903159 ~ 51903638 (-) True XLOC_008184
TCONS_00016532 lncRNA downstream 682817 51826078 ~ 51837387 (-) True XLOC_008182
TCONS_00016092 lncRNA downstream 900746 51611220 ~ 51619458 (-) True XLOC_008179
TCONS_00016534 lncRNA upstream 54503 52575963 ~ 52576704 (-) True XLOC_008192
TCONS_00015932 mRNA downstream 39543 52476520 ~ 52480661 (-) False XLOC_008189
TCONS_00015931 mRNA downstream 86912 52418247 ~ 52433292 (-) True XLOC_008188
TCONS_00015929 mRNA downstream 111808 52399777 ~ 52408396 (-) False XLOC_008187
TCONS_00015927 mRNA downstream 111819 52395426 ~ 52408385 (-) False XLOC_008187
TCONS_00015926 mRNA downstream 111897 52377557 ~ 52408307 (-) False XLOC_008187
TCONS_00015935 mRNA upstream 1257 52522717 ~ 52552875 (-) False XLOC_008191
TCONS_00015936 mRNA upstream 4127 52525587 ~ 52542928 (-) True XLOC_008191
TCONS_00015937 mRNA upstream 52016 52573476 ~ 52583021 (-) False XLOC_008192
TCONS_00015933 other downstream 41260 52476681 ~ 52478944 (-) True XLOC_008189
TCONS_00015930 other downstream 111387 52405755 ~ 52408817 (-) True XLOC_008187
TCONS_00015928 other downstream 114496 52398233 ~ 52405708 (-) False XLOC_008187
TCONS_00015925 other downstream 470930 52049158 ~ 52049274 (-) True XLOC_008185
TCONS_00015923 other downstream 767007 51753080 ~ 51753197 (-) True XLOC_008181

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
bowfin (Amia calva) AMCG00011200 True 1308 mRNA 0.66 1 CM030133.1 13743918 ~ 13745225 (-)