RNA id: TCONS_00015937


Basic Information

Item Value
RNA id TCONS_00015937
length 4269
RNA type mRNA
GC content 0.46
exon number 9
gene id XLOC_008192
representative False

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 52573476 ~ 52583021 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCTCGAGTTCTGGACTGTGTATGTTGATATTCCCGCGGTGATGATGGCAGATGAGCTCTTACATCTGTGTGATGTGGACAGTCTGAGTGCAGACATGCAGAAGAGAGAACAGCAGGAGTTTACAGCGAGCAGGAGGATTTACAGCCGAGCGAGGAGGAGGGTGTTCGCTCAGTTCGTGGCATCGAAGCAGGCTCCTGCGTCCAGCGGCTCGGGGTGTGTGTGGCTCTgctgcggacacacacacactgatcccgCTTCCATACACAGACACGCGTCCAGCAGCCACAGCGCAGAGATCCACCAGCTGACCAGCGACTCACTGAAGCTTCAGAAGACTCACGGCGACTCACTGAATCATCAGACTCTCAGCGACTCAGTGAATCATCAGACTCTCAGCGACTCAGTGAATCATCAAAACACTGACGGTGACTCGGCGAGTGTGTGTGCTGCAGCAGGAGTGTGTGTTGCTGGATCAGCAGACGTGTCCTCCTGGATGCCAGACATGAGCCACGTCTCAGAACATGAGCTGAGCAGcggtGAGGGTGTGGTGCTGCTCTTCTACTGCTACTGTCTCCTCCCGGACCCGCAGCTCATCTCCCGCTGGCAgcagcagctctgcacaacaCTGCGCCTCACAGGCAAGGTTCGAGTGGCGACCGAAGGAATAAATGGTACAGTGGGCGGAACCGCAACCGGCGCTGAGCTCTACATACAGACGATGCTCCGACATCCAGCGTTCAGCAGCATGCAGACGGAGGACTTCaagagaagTGCCGGTGGTGCGCAGTGTTTCTCCGGCCTGAAGGTTGGTGTACACCGAGAGATCGTGCCGATGGGTGTGGATCCAGAGCTCGTCTCCTACAGATCCGCCGGGATCCACCTGGAGCCGCAGGAGTTCCACCGGGAGGTGCAGGCGCTGGTGGAGAGCCCGGAGCTGCAGGCCGACACCATACTGCTGGACTGCAGGAACTTCTACGAGAGCAAAATTGGTCAGTTCAGCTGCTGTGTGGCTCCAGATATCCGCAAGTTCAGCTACTTCCCTGATTACGTGGACCAGAACCTGGATCTGTTTCGGGACAAGAGGGTTCTGATGTACTGCACCGGCGGCATCCGCTGCGAACGCGGCTCTGCGTACCTGCGCTCCAAGcgcgTCTGTAAGGAGGTGTACCAGCTGAAGGGAGGTGTTCATAAGTACCTGGAGCAGTTCCCTGACGGATTCTACCGCGGTAAACTCTTCGTGTTCGACGAGCGCTACGCCATCGCCTACAACCAGGACGTCATCTCAGTGTGTCGGTACTGCTCTCAGCCGTGGGATCAGTACGTGCGCTGCTCTACAGGTGTGTGTGGTCAGCTGCTGCTGTCGTGTGTGTCCTGCCGTGTGTGGTCTGACCGCCTGCTGTGAAGAGTGTCAGGAGTCCAGCCGAGAGCAGTGCCAGTGCACCCGGAGCCGGCCGcgcatacccacacacacacacacacacactgctcagaaCAGTcaataaatcacacacacacacacacacactgctcagaaCAGTCAgtagatctcacacacacacacacacacacgcacacacacacacactgctcagaaCAGTCAGTAGATCAACaatcatgacacacacacacacacacacacacacacacacacacacactgctcagaaCACTCAAATCAACAatcatgatacacacacactcaataaaTGTGCAGTCATGATCCTCCGTCTGTTTATTTCTCAATTAAAGCACACATTTACATATAAATCAACACTTTGATcagctgcgcacacacacacacacacacacacacacacgttaaagGCGCAGTACACCCAGAAATGAGCActcctccatcatcatcatctcctCACAGTTGTGTtgaacacacatgcagacacactgCTGAACGGCTGATCGTGCTGTAGACGCTGGTGTGTTCAGCAGAAGCTCATGATGGATCAGACACAGCTGAGTGAGCGGTGTTCAACAGAGTGTGCGCTGCGCCTTTAATCAGACAATATTCCTGAAGCTCAGATCATATAaatacagaacacacacacacacacacacacacacacacacacagaggcacaCGCAGGCGTCTGGAGAGAATCAGCTGGGGATCAGGCCGGAGGCTCCTGATCAGCTCCTTTGGCAGATATACAGGCTTCAGCACCTGCAACACAGACCCCGCTGTTACTGGACCATCCTCCAGCGCTCAACATGTTACACAAGCAGATCTGTCAGATTAATGCCAGTGCTGCGGTGCTGAGGCCGTGTCCACACTCATACTCCACACCGAGACGCGCGTCAGGACAGGAAAGCCTCTCGTTGTAAGCACTGTCCAAGGGGGATTAAGGTGTGGTGTTCAGGGTGGGAAACCATGACCGTTTCAGTCATGTGACTGATCCAGCTGACATGCTGGAGGAcactgtgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggtgtgtgtgtgtatggcctCTGTTCAGCGCTCAGGCAGTGTTTGCTGGAGCTGTTGTTCAgatcagagcacacacacacacacacacacacacacactgtttgagAGAGTCGGTCAGCAGCAGTGGGCATGAGCAGGTGAAGCGTCTGCGTCTGTGTGCTGCTCCGTGCATCAACCAGAGGCCTTCAGTGTGGGTGATGGAGAGACGTGAAGAGCAGAGTGTGGACACGAGCACTCGCAGACCAGCACAGCGGGCAGATGTGTGTGCATTAGTGTAGACGCAGCCGGAGTACAGTTTATTACAATAAAGAGACATTAAACACCAGGAATAATGcacagaagaagaagagaaacaactttactattgatttaaaaaataaaataatcaatgtttaaaaataatcccAAAATATCCACAATCAAAACATaagaaaacagtcaaaatattacAGGAAAAGAGTCGAGATATTATGAGAATGAAGCCGCAGTAATGAGATTATGTTTGCAATATTTGAGTTTATTCTCTAATATATCCACTCATTCTAACATTTCTacttttcctataatattttgctTTATTCGATCACTACGGCTTAATTCTCTGAACATAAACATTTGGAgaataaaattaagttaactttaatcACATATTAAGACTTTATTCTCTATATATTATGACTTTAATCCAGTTCTCGTAGACCTGTTAGCATGTCGCTAATACCCCATGATGGAAATAAAACAGGAAGCTCTTCCACACTTCACAGAGGTGTAAATGAAATGTCTGAATATTGACGGCTCATTCAGAATACTGTAGAGGATGCTGACAGTGAAGACGTGACGGACTCTACACTGATCCTGAGTCAGTTCTGAAATGCACACATCTGCATGAGCCTGACTCTGCTGCCTGTGCCcatcagtgatgatgatgatgatgatgatgatgagggttAGGGGCTGATGTGCTGAGCTCTACACTCCTAATATGCACCGTTTGATGGATTGATTTTGTCGTCTTTCTCTCTGATCACTCCATCATCTTTCCTTCATCAGTATCTTGATGCAGTCTCTACATGTACATGGTTTGTTTTCTTCTAATTAATTcacaagtaaaataataataagctgTGTGTCTAATAAACTGACGCTTCATCTGATTTggctgctggactgctccatgatcaGGAGTGGAGTGAAGGCACACgatgtaataattacattaacattatattgaCCATCCTCATAGAAGATTTACCACAGCGCCAACATCAGTGCCACAGTAAACCAATAAAAACCAAAGATTGCATGATTAAAGTTGTAATACTTCAGGCGTCAAGTCAAAATGAGAGACAAGAATAAAGTAAAAATACTGTGAGAAGTTGTAGTGATGTGAGATTAAAGTTGCAGTGATGCAagaataaaatcaaaatattcaGAGAAAATAGTTGAAATATGAGAATAATGTTGAAATGCTACAAAAATAaagtagaaattctgtgaaaataCTGCACAAATGAAGAcgaaaataaacttaaaatattacgaaaataaagttgaaatattGAGAGAATAAAGTCGAAATATGAGAATAATGTTGAAATATTAGAAAgtctaaatattataaaaatattacaaaaagtaaatattacaaaaagttGTAGTAATACAAGGATAAagtcaaaataatacaaaaacttgaaatattataaagtaaatactacaaaaataaagtttaaatattataaaaatgttatgaaaatactaatattacattaaaagtaGTAAAACAAGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000166924

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00016533 lncRNA downstream 164659 52398233 ~ 52408817 (-) False XLOC_008187
TCONS_00016094 lncRNA downstream 381784 52189877 ~ 52191692 (-) True XLOC_008186
TCONS_00016093 lncRNA downstream 669838 51903159 ~ 51903638 (-) True XLOC_008184
TCONS_00016532 lncRNA downstream 736089 51826078 ~ 51837387 (-) True XLOC_008182
TCONS_00016092 lncRNA downstream 954018 51611220 ~ 51619458 (-) True XLOC_008179
TCONS_00015935 mRNA downstream 20601 52522717 ~ 52552875 (-) False XLOC_008191
TCONS_00015936 mRNA downstream 30548 52525587 ~ 52542928 (-) True XLOC_008191
TCONS_00015934 mRNA downstream 52016 52520204 ~ 52521460 (-) True XLOC_008190
TCONS_00015932 mRNA downstream 92815 52476520 ~ 52480661 (-) False XLOC_008189
TCONS_00015931 mRNA downstream 140184 52418247 ~ 52433292 (-) True XLOC_008188
TCONS_00015933 other downstream 94532 52476681 ~ 52478944 (-) True XLOC_008189
TCONS_00015930 other downstream 164659 52405755 ~ 52408817 (-) True XLOC_008187
TCONS_00015928 other downstream 167768 52398233 ~ 52405708 (-) False XLOC_008187
TCONS_00015925 other downstream 524202 52049158 ~ 52049274 (-) True XLOC_008185
TCONS_00015923 other downstream 820279 51753080 ~ 51753197 (-) True XLOC_008181

Expression Profile

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