RNA id: TU251509


Basic Information

Item Value
RNA id TU251509
length 216
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G221735
representative True

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5703909 ~ 5704167 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCAGGGACAGGCAGGGATCAAGACAGGCGGCAAACAATCACAGTCCAGGGTACAAGCAAAGTTCAGGGCAGGCGGCAGAGGTTCACAGATAACAAACAGTCCGGGTAATAACAAGATATCAGTCCACAGAACTAACGCTCAGAAATGACTACCGTAGCAAATCAAGACTTCGCAAAGATGTGGTGTGCGTGCGTGTCTTAAATAGTGTGTGTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU251475 lncRNA downstream 52809 5650870 ~ 5651100 (-) True G221717
TU251474 lncRNA downstream 60316 5643314 ~ 5643593 (-) True G221716
TU251473 lncRNA downstream 66064 5637590 ~ 5637845 (-) True G221715
TU251472 lncRNA downstream 66981 5636372 ~ 5636928 (-) True G221714
TU251337 lncRNA downstream 190435 5511264 ~ 5513474 (-) True G221592
TU251516 lncRNA upstream 54946 5759113 ~ 5759335 (-) True G221742
TU251518 lncRNA upstream 58484 5762651 ~ 5762972 (-) True G221744
TU251519 lncRNA upstream 64204 5768371 ~ 5768592 (-) True G221745
TU251559 lncRNA upstream 151505 5855672 ~ 5909748 (-) True G221780
TU251584 lncRNA upstream 244253 5948420 ~ 5948656 (-) True G221804
CI01000051_05690134_05690418.mRNA mRNA downstream 13491 5689547 ~ 5690418 (-) True CI01000051_05690134_05690418
CI01000051_05679116_05685755.mRNA mRNA downstream 17953 5678771 ~ 5685956 (-) True CI01000051_05679116_05685755
CI01000051_05646139_05649781.mRNA mRNA downstream 53961 5645678 ~ 5649948 (-) True CI01000051_05646139_05649781
CI01000051_05595595_05606236.mRNA mRNA downstream 97657 5595037 ~ 5606252 (-) True CI01000051_05595595_05606236
CI01000051_05545276_05570550.mRNA mRNA downstream 133359 5545059 ~ 5570550 (-) True CI01000051_05545276_05570550
CI01000051_05743847_05749675.mRNA mRNA upstream 39504 5743671 ~ 5749675 (-) True CI01000051_05743847_05749675
CI01000051_05752434_05755144.mRNA mRNA upstream 48123 5752290 ~ 5755144 (-) True CI01000051_05752434_05755144
CI01000051_05949486_05950751.mRNA mRNA upstream 245176 5949343 ~ 5950853 (-) True CI01000051_05949486_05950751
CI01000051_06015846_06019716.mRNA mRNA upstream 311540 6015707 ~ 6019716 (-) True CI01000051_06015846_06019716
CI01000051_06033224_06041180.mRNA mRNA upstream 328875 6033042 ~ 6041180 (-) True CI01000051_06033224_06041180
TU251315 other downstream 185085 5513952 ~ 5518824 (-) True G221575
TU249582 other downstream 1545806 4155730 ~ 4158103 (-) True G220041
TU249434 other downstream 2742415 2961403 ~ 2961494 (-) True G219914
TU248216 other downstream 2863277 2840270 ~ 2840632 (-) True G218861
TU248069 other downstream 3157450 2527343 ~ 2546459 (-) True G218728
TU251621 other upstream 428606 6132773 ~ 6133579 (-) True G221840
TU252631 other upstream 2637982 8342149 ~ 8342652 (-) True G222729
TU252632 other upstream 2638803 8342970 ~ 8343438 (-) True G222730

Expression Profile