RNA id: TU251584



Basic Information


Item Value
RNA id TU251584
length 237
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G221804
representative True

Chromosome Information


Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5948420 ~ 5948656 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GATTGGTAGGTCTATTAGTAAATTCTCTTGACTTTCACAAACTTTGTTTGATTTATATGCCAACGGTGACTGTTCAAAAATGGCAAATGTTCAAAAAGGCTTGTTTTTTGCATCACGTTTGCATGCCTGTAACTTAAGAAGAAGTATATCTTAATATCCTTCTAGATTGTCATTCTTAATAAACTTTCCTTTTGAAATCTTCATTTTCAAGGCCCTATATAGTTCAGTCCCATAGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU251559 lncRNA downstream 38672 5855672 ~ 5909748 (-) True G221780
TU251519 lncRNA downstream 179828 5768371 ~ 5768592 (-) True G221745
TU251518 lncRNA downstream 185448 5762651 ~ 5762972 (-) True G221744
TU251516 lncRNA downstream 189085 5759113 ~ 5759335 (-) True G221742
TU251509 lncRNA downstream 244253 5703909 ~ 5704167 (-) True G221735
TU251603 lncRNA upstream 30085 5978741 ~ 5978996 (-) True G221822
TU251606 lncRNA upstream 35707 5984363 ~ 5987132 (-) True G221825
TU251611 lncRNA upstream 68977 6017633 ~ 6017970 (-) True G221830
TU251617 lncRNA upstream 151903 6100559 ~ 6100763 (-) True G221836
TU251618 lncRNA upstream 153066 6101722 ~ 6102002 (-) True G221837
CI01000051_05752434_05755144.mRNA mRNA downstream 193276 5752290 ~ 5755144 (-) True CI01000051_05752434_05755144
CI01000051_05743847_05749675.mRNA mRNA downstream 198745 5743671 ~ 5749675 (-) True CI01000051_05743847_05749675
CI01000051_05690134_05690418.mRNA mRNA downstream 258002 5689547 ~ 5690418 (-) True CI01000051_05690134_05690418
CI01000051_05679116_05685755.mRNA mRNA downstream 262464 5678771 ~ 5685956 (-) True CI01000051_05679116_05685755
CI01000051_05646139_05649781.mRNA mRNA downstream 298472 5645678 ~ 5649948 (-) True CI01000051_05646139_05649781
CI01000051_05949486_05950751.mRNA mRNA upstream 687 5949343 ~ 5950853 (-) True CI01000051_05949486_05950751
CI01000051_06015846_06019716.mRNA mRNA upstream 67051 6015707 ~ 6019716 (-) True CI01000051_06015846_06019716
CI01000051_06033224_06041180.mRNA mRNA upstream 84386 6033042 ~ 6041180 (-) True CI01000051_06033224_06041180
CI01000051_06041891_06047349.mRNA mRNA upstream 92963 6041619 ~ 6047710 (-) True CI01000051_06041891_06047349
CI01000051_06052696_06090422.mRNA mRNA upstream 102397 6051053 ~ 6090422 (-) True CI01000051_06052696_06090422
TU251315 other downstream 429596 5513952 ~ 5518824 (-) True G221575
TU249582 other downstream 1790317 4155730 ~ 4158103 (-) True G220041
TU249434 other downstream 2986926 2961403 ~ 2961494 (-) True G219914
TU248216 other downstream 3107788 2840270 ~ 2840632 (-) True G218861
TU248069 other downstream 3401961 2527343 ~ 2546459 (-) True G218728
TU251621 other upstream 184117 6132773 ~ 6133579 (-) True G221840
TU252631 other upstream 2393493 8342149 ~ 8342652 (-) True G222729
TU252632 other upstream 2394314 8342970 ~ 8343438 (-) True G222730

Expression Profile