RNA id: TU250663



Basic Information


Item Value
RNA id TU250663
length 262
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G220993
representative True

Chromosome Information


Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6020903 ~ 6021164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGCAAATACTGAATTCTCTTTCAAGTCTTGCAAATTCACACAAAAATTATGTCAACATGCCAATTTGGCAAGTATCCTAGCAAACATAGGCGGTTATGTCTTAAGTGAACGTATAACAGTCGAAAAAATACAACGCATGTGTAACAGTATGTACTGGATCGAGCATTATGTCTTAAAGGGAAAGAAGCCTATATTCCTGCTGCCTGTGTTTTTAAAGTTAATCAAACAACAAATGACAAAGAAATCACTCACTGCTCTTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU250661 lncRNA upstream 925 6019436 ~ 6019978 (+) True G220991
TU250659 lncRNA upstream 1146 6019321 ~ 6019757 (+) False G220991
TU250657 lncRNA upstream 1146 6019436 ~ 6019757 (+) False G220991
TU250633 lncRNA upstream 4721 6015173 ~ 6016182 (+) True G220967
TU250649 lncRNA upstream 30789 5989806 ~ 5990114 (+) True G220983
TU250662 lncRNA downstream 1783 6022947 ~ 6023186 (+) True G220992
TU250665 lncRNA downstream 2735 6023899 ~ 6024130 (+) True G220995
TU250666 lncRNA downstream 4569 6025733 ~ 6025954 (+) True G220996
TU250668 lncRNA downstream 5451 6026615 ~ 6026902 (+) True G220998
TU250631 lncRNA downstream 67335 6088499 ~ 6090361 (+) True G220966
CI01000051_05996289_06007664.mRNA mRNA upstream 12345 5995995 ~ 6008558 (+) True CI01000051_05996289_06007664
CI01000051_05969849_05970699.mRNA mRNA upstream 49434 5969849 ~ 5971469 (+) True CI01000051_05969849_05970699
CI01000051_05955881_05966250.mRNA mRNA upstream 54478 5955417 ~ 5966425 (+) True CI01000051_05955881_05966250
CI01000051_05935542_05939529.mRNA mRNA upstream 81271 5935443 ~ 5939632 (+) True CI01000051_05935542_05939529
CI01000051_05831209_05933202.mRNA mRNA upstream 87266 5831209 ~ 5933637 (+) True CI01000051_05831209_05933202
CI01000051_06113450_06128623.mRNA mRNA downstream 92286 6113450 ~ 6129084 (+) True CI01000051_06113450_06128623
CI01000051_06136031_06140543.mRNA mRNA downstream 114867 6136031 ~ 6140633 (+) True CI01000051_06136031_06140543
CI01000051_06155906_06164505.mRNA mRNA downstream 134742 6155906 ~ 6164505 (+) True CI01000051_06155906_06164505
CI01000051_06167413_06171890.mRNA mRNA downstream 146039 6167203 ~ 6172507 (+) True CI01000051_06167413_06171890
CI01000051_06286985_06304439.mRNA mRNA downstream 265821 6286985 ~ 6304439 (+) True CI01000051_06286985_06304439
TU249310 other upstream 968870 5018305 ~ 5052033 (+) False G219803
TU249308 other upstream 971093 4914974 ~ 5049810 (+) False G219803
TU249297 other upstream 971093 4944958 ~ 5049810 (+) False G219803
TU249302 other upstream 971093 4959429 ~ 5049810 (+) False G219803
TU249300 other upstream 971093 5045115 ~ 5049810 (+) False G219803
TU250885 other downstream 804635 6825799 ~ 6833068 (+) True G221187
TU251039 other downstream 1320877 7342041 ~ 7342546 (+) True G221319
TU251108 other downstream 1388359 7409523 ~ 7413007 (+) True G221386
TU251044 other downstream 2084479 8105643 ~ 8128075 (+) True G221324
TU252626 other downstream 2321778 8342942 ~ 8343448 (+) True G222727

Expression Profile