RNA id: TU250969


Basic Information

Item Value
RNA id TU250969
length 286
lncRNA type read_through
GC content 0.37
exon number 2
gene id G221256
representative False

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7043663 ~ 7152095 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTCTTGCCCTCCTTGTGCAAAGTGTCAATGGTCGTCTTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATGATTGTGTAGCCTACAGAACTAGACTGAGAGACCATTTAAAGGCCTTTGCAGGTGTTTTGAGTTAATTAGCTGATTAGAGTGTGGCACCAGGTGTCTTCAATATTGAACCTTTTCACAATATTCTAATTTTCTGAGATACTGAGTTTGGGATTTTCCTTAGTTGTCAGTTATAATCATCAAAATTAAAAGAAATAAACATTTGAAATATATCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU250966 lncRNA upstream 95768 6947384 ~ 6947895 (+) True G221254
TU250906 lncRNA upstream 131952 6847641 ~ 6911711 (+) True G221208
TU250886 lncRNA upstream 247057 6794991 ~ 6796606 (+) True G221188
TU250892 lncRNA upstream 249727 6785486 ~ 6793936 (+) True G221194
TU250767 lncRNA upstream 312378 6729783 ~ 6729852 (+) True G221089
TU250996 lncRNA downstream 9162 7161166 ~ 7161367 (+) True G221280
TU250999 lncRNA downstream 55367 7207371 ~ 7207573 (+) True G221283
TU251008 lncRNA downstream 63359 7215363 ~ 7215579 (+) True CI01000051_07215332_07217167
TU251071 lncRNA downstream 70713 7222717 ~ 7222987 (+) True G221351
TU251073 lncRNA downstream 72886 7224890 ~ 7225167 (+) True G221353
CI01000051_07015896_07020569.mRNA mRNA upstream 23049 7015383 ~ 7020614 (+) True CI01000051_07015896_07020569
CI01000051_06985393_07011299.mRNA mRNA upstream 32260 6983354 ~ 7011403 (+) True CI01000051_06985393_07011299
CI01000051_06970612_06971675.mRNA mRNA upstream 71821 6970422 ~ 6971842 (+) True CI01000051_06970612_06971675
CI01000051_06948569_06952962.mRNA mRNA upstream 89567 6948569 ~ 6954096 (+) True CI01000051_06948569_06952962
CI01000051_06917282_06944243.mRNA mRNA upstream 99396 6917282 ~ 6944267 (+) True CI01000051_06917282_06944243
CI01000051_07170752_07194524.mRNA mRNA downstream 18748 7170752 ~ 7194524 (+) True CI01000051_07170752_07194524
CI01000051_07215332_07217167.mRNA mRNA downstream 63328 7215332 ~ 7217708 (+) False CI01000051_07215332_07217167
CI01000051_07253002_07255432.mRNA mRNA downstream 100197 7252201 ~ 7255620 (+) True CI01000051_07253002_07255432
CI01000051_07259968_07261598.mRNA mRNA downstream 107714 7259718 ~ 7261731 (+) True CI01000051_07259968_07261598
CI01000051_07267084_07283654.mRNA mRNA downstream 115007 7267011 ~ 7284015 (+) True CI01000051_07267084_07283654
TU250885 other upstream 210595 6825799 ~ 6833068 (+) True G221187
TU249310 other upstream 1991630 5018305 ~ 5052033 (+) False G219803
TU249297 other upstream 1993853 4944958 ~ 5049810 (+) False G219803
TU251039 other downstream 190037 7342041 ~ 7342546 (+) True G221319
TU251108 other downstream 257519 7409523 ~ 7413007 (+) True G221386
TU251044 other downstream 953639 8105643 ~ 8128075 (+) True G221324
TU252626 other downstream 1190938 8342942 ~ 8343448 (+) True G222727

Expression Profile