RNA id: TU250999


Basic Information

Item Value
RNA id TU250999
length 203
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G221283
representative True

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7207371 ~ 7207573 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGCTTTTTCCATAAGTTGAATAGGGAAGGCGTAGGATGTAGCGTAAGCTTTTTGAACTGCAAGAGTTTTACACTTTCTATGTAAGTTGAATATGGAAGGCGGTCTGGCGGAAGCCAGATATTTTATTTTTAACTTGTTAAATATGGACATTTTTTTTACACAAATGCATCTCTTCGCTTCAGAAGGCCTTTATTATCCCCCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU250996 lncRNA upstream 46004 7161166 ~ 7161367 (+) True G221280
TU250970 lncRNA upstream 55276 7043731 ~ 7152095 (+) True G221256
TU250969 lncRNA upstream 55367 7043663 ~ 7152004 (+) False G221256
TU250968 lncRNA upstream 55367 7043731 ~ 7152004 (+) False G221256
TU250966 lncRNA upstream 259476 6947384 ~ 6947895 (+) True G221254
TU251008 lncRNA downstream 7790 7215363 ~ 7215579 (+) True CI01000051_07215332_07217167
TU251071 lncRNA downstream 15144 7222717 ~ 7222987 (+) True G221351
TU251073 lncRNA downstream 17317 7224890 ~ 7225167 (+) True G221353
TU251080 lncRNA downstream 40597 7248170 ~ 7248498 (+) True G221360
TU251036 lncRNA downstream 77414 7284987 ~ 7285294 (+) True G221316
CI01000051_07170752_07194524.mRNA mRNA upstream 12847 7170752 ~ 7194524 (+) True CI01000051_07170752_07194524
CI01000051_07125875_07127476.mRNA mRNA upstream 79524 7125875 ~ 7127847 (+) True CI01000051_07125875_07127476
CI01000051_07081085_07109551.mRNA mRNA upstream 97765 7081085 ~ 7109606 (+) True CI01000051_07081085_07109551
CI01000051_07015896_07020569.mRNA mRNA upstream 186757 7015383 ~ 7020614 (+) True CI01000051_07015896_07020569
CI01000051_06985393_07011299.mRNA mRNA upstream 195968 6983354 ~ 7011403 (+) True CI01000051_06985393_07011299
CI01000051_07215332_07217167.mRNA mRNA downstream 7759 7215332 ~ 7217708 (+) False CI01000051_07215332_07217167
CI01000051_07253002_07255432.mRNA mRNA downstream 44628 7252201 ~ 7255620 (+) True CI01000051_07253002_07255432
CI01000051_07259968_07261598.mRNA mRNA downstream 52145 7259718 ~ 7261731 (+) True CI01000051_07259968_07261598
CI01000051_07267084_07283654.mRNA mRNA downstream 59438 7267011 ~ 7284015 (+) True CI01000051_07267084_07283654
CI01000051_07287140_07287867.mRNA mRNA downstream 79567 7287140 ~ 7288035 (+) True CI01000051_07287140_07287867
TU250885 other upstream 374303 6825799 ~ 6833068 (+) True G221187
TU249310 other upstream 2155338 5018305 ~ 5052033 (+) False G219803
TU249297 other upstream 2157561 4944958 ~ 5049810 (+) False G219803
TU251039 other downstream 134468 7342041 ~ 7342546 (+) True G221319
TU251108 other downstream 201950 7409523 ~ 7413007 (+) True G221386
TU251044 other downstream 898070 8105643 ~ 8128075 (+) True G221324
TU252626 other downstream 1135369 8342942 ~ 8343448 (+) True G222727

Expression Profile