RNA id: TU252711


Basic Information

Item Value
RNA id TU252711
length 260
lncRNA type intronic
GC content 0.35
exon number 2
gene id G222787
representative True

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8384606 ~ 8385159 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCTGCTTCACCACAAAGCTCTGCAGCAAATGCACAGAAATCAAGATTCAGAAAAGTGCTGTGATAACTCTGTTTAAATTACAATAATTAAAATAAACTAGACTTTAGATTTAAATAGACATTCATTTCTGTAGTATCCTCACTCAAAGCCTTTGATGGCAGCATTCCTTCATCACCGGATAAACACACGTGTGATCATCTGTCCCTAAGATGTTCCTATCAGATGTTAAATAAACATTTAATAAGCACCTTTAAGATGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU252659 lncRNA downstream 22846 8361452 ~ 8361760 (-) True G222748
TU252657 lncRNA downstream 25004 8359155 ~ 8359602 (-) True G222746
TU252541 lncRNA downstream 121466 8262727 ~ 8263140 (-) True G222667
TU252535 lncRNA downstream 131831 8252472 ~ 8252775 (-) True G222661
TU252532 lncRNA downstream 136384 8248002 ~ 8248222 (-) True CI01000051_08247858_08254018
CI01000051_08354973_08355986.mRNA mRNA downstream 28572 8354925 ~ 8356034 (-) True CI01000051_08354973_08355986
CI01000051_08346268_08346909.mRNA mRNA downstream 37548 8346146 ~ 8347058 (-) True CI01000051_08346268_08346909
CI01000051_08247858_08254018.mRNA mRNA downstream 130340 8247643 ~ 8254266 (-) False CI01000051_08247858_08254018
CI01000051_08087374_08111384.mRNA mRNA downstream 273011 8086938 ~ 8111595 (-) True CI01000051_08087374_08111384
CI01000051_07836858_07853522.mRNA mRNA downstream 530495 7836825 ~ 7854111 (-) True CI01000051_07836858_07853522
CI01000051_08401449_08401739.mRNA mRNA upstream 16054 8401213 ~ 8401786 (-) True CI01000051_08401449_08401739
TU252632 other downstream 41168 8342970 ~ 8343438 (-) True G222730
TU252631 other downstream 41954 8342149 ~ 8342652 (-) True G222729
TU251621 other downstream 2251027 6132773 ~ 6133579 (-) True G221840
TU251315 other downstream 2865782 5513952 ~ 5518824 (-) True G221575
TU249582 other downstream 4226503 4155730 ~ 4158103 (-) True G220041

Expression Profile