RNA id: CI01000053_06308157_06310323.mRNA


Basic Information

Item Value
RNA id CI01000053_06308157_06310323.mRNA
length 956
RNA type mRNA
GC content 0.47
exon number 2
gene id CI01000053_06308157_06310323
representative False

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 6307318 ~ 6310466 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACAGTGAGAGTGGTCAGGAAGGAAACCTCTCCCCCTCCCCTAACGCCATTGGCCTAGGGTACCGTCAATCTGACAATGTTTAGATGTTACATTTATAGCCCATAATTCAATCTTTCAAGGTTTTTTTGTTTTGTAGACACCAAATGACTGGCCAGACCTGTGGACAGCCAAACAAATCCAACAACCCCTGGTTAGGATACAAAAACAAAAAAAAATTGGTTCGTGAGTATTTACAACTAGCTCATGTCATGCGTTACCCTGATGAGTCCCTCTGCATCTTCTATCATGCGGAACTCAATGCACAGACAAAAGTTCTGGTATGTGTCCTCGAGGATCCCTCTGCAATCCCCACACCTGACATGGAACCTCTGCTAATGGAGAAGGAGCTGTCCCGGAGCTAAAGCCTGAAGCCAGTGTTGTTCCAGAGCTCTAGCTAGTGCTCTGAAAGTCTATCCTGGCTGAGCCATTCCTGGAATGGCTTCCCACCCATGTCCCCACCTCTGGAAAATATATATATATCAGTCCCAGTCCATTCATGTTGAAATAATGGACATGCCAGTTTCTACTTGTTCCTGCCTCCTACGTTATCTCCTTTGTCTCCACCCAGTCTCCTGGCTCCTTCATCTCCACCCAGTTTTCTGGCTCCTTCGTGTCTGCCCAGTCTCCTGGCTTCTTCATCTCTGCCTAGTTTTCTGGCTCCTTCGTCTCTATCCAGTCCTCTGATCGTTAGTCTCCACCTAGTCTCCTGGCTCCTTTGTCACCTTCAGCCCTACAGCGTCACCAGGATTTATAGTTTCGCTGATTCTGCCATGGATTCCCCCATCGGCTCCTCCATGGACTCTTCGTTTGGTTCAGTTCTTTGTCCAGTATTGCCTTTGTGCAGATGTCAAAGCTGTTGCATTTGTCTACTCCTGCAACTCCTGTGATTTGGATGATCTTTTTTGTTTATAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU260146 lncRNA downstream 72808 6234514 ~ 6234794 (-) True G229236
TU260145 lncRNA downstream 74441 6232905 ~ 6233161 (-) True G229235
TU260133 lncRNA downstream 84373 6222660 ~ 6223229 (-) True G229227
TU260109 lncRNA downstream 86378 6192641 ~ 6221224 (-) True G229207
TU260117 lncRNA downstream 153839 6152790 ~ 6153763 (-) True G229212
TU260358 lncRNA upstream 412758 6723224 ~ 6724500 (-) True G229423
TU260394 lncRNA upstream 455164 6765630 ~ 6766857 (-) True G229459
TU260399 lncRNA upstream 463881 6774347 ~ 6774826 (-) True G229464
TU260400 lncRNA upstream 464364 6774830 ~ 6775086 (-) True G229465
TU260406 lncRNA upstream 468854 6779320 ~ 6779632 (-) True G229471
CI01000053_06287804_06296687.mRNA mRNA downstream 10915 6287214 ~ 6296687 (-) True CI01000053_06287804_06296687
CI01000053_06162569_06179766.mRNA mRNA downstream 127500 6162079 ~ 6180102 (-) True CI01000053_06162569_06179766
CI01000053_06060129_06071679.mRNA mRNA downstream 235923 6059609 ~ 6071679 (-) True CI01000053_06060129_06071679
CI01000053_06038638_06043939.mRNA mRNA downstream 263663 6038336 ~ 6043939 (-) True CI01000053_06038638_06043939
CI01000053_05732296_05750809.mRNA mRNA downstream 556793 5731378 ~ 5750809 (-) True CI01000053_05732296_05750809
CI01000053_06662264_06720098.mRNA mRNA upstream 351120 6661586 ~ 6720662 (-) True CI01000053_06662264_06720098
CI01000053_06768909_06775364.mRNA mRNA upstream 457506 6767972 ~ 6776006 (-) True CI01000053_06768909_06775364
CI01000053_06777287_06806952.mRNA mRNA upstream 466776 6777242 ~ 6806952 (-) True CI01000053_06777287_06806952
CI01000053_06829449_06831635.mRNA mRNA upstream 518307 6828773 ~ 6831635 (-) True CI01000053_06829449_06831635
CI01000053_06881417_06887257.mRNA mRNA upstream 570229 6880695 ~ 6887369 (-) True CI01000053_06881417_06887257
TU259584 other downstream 375361 5931592 ~ 5932241 (-) True G228750
TU259481 other downstream 519912 5784483 ~ 5787690 (-) True G228651
TU258305 other downstream 2219862 4087237 ~ 4087740 (-) True G227604
TU257616 other downstream 2754631 3552883 ~ 3552971 (-) True G227041

Expression Profile