RNA id: TU255990



Basic Information


Item Value
RNA id TU255990
length 239
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G225665
representative True

Chromosome Information


Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 747381 ~ 747619 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTGTTTCGAAATTTCAATGGTTCACCACTGGAGGGCGTGACTTTGGCAGTTTGATACACGCTCCGAACCACTGATTCGAATCAAAAGATTCGTAAAGCTTCGAAGATTCATGAAGCAGTACGTTTGAAATCGCCCATCACTAGATATTGTTGAATAAAGTCGTTGTTTTGTTTTTTTGGCACACAAAAAGTATTCTCGTCGCTTCATAACATTAAGGTTGAACCACTGTAGTCACATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU255941 lncRNA downstream 176124 571056 ~ 571257 (-) True G225622
TU255939 lncRNA downstream 191322 552476 ~ 556059 (-) True G225620
TU255884 lncRNA downstream 219851 526117 ~ 527530 (-) True G225570
TU255885 lncRNA downstream 221436 524494 ~ 525945 (-) True G225571
TU255925 lncRNA downstream 254092 493053 ~ 493289 (-) True G225606
TU255993 lncRNA upstream 1632 749251 ~ 749495 (-) True G225668
TU255876 lncRNA upstream 60548 808167 ~ 809734 (-) True G225563
TU255872 lncRNA upstream 66009 813628 ~ 814240 (-) True G225561
TU256003 lncRNA upstream 68785 816404 ~ 816668 (-) True G225678
TU256012 lncRNA upstream 158941 906560 ~ 907001 (-) True G225687
CI01000053_00739813_00746803.mRNA mRNA downstream 350 739662 ~ 747031 (-) True CI01000053_00739813_00746803
CI01000053_00733357_00737206.mRNA mRNA downstream 10054 733315 ~ 737327 (-) True CI01000053_00733357_00737206
CI01000053_00696659_00703507.mRNA mRNA downstream 43874 696362 ~ 703507 (-) True CI01000053_00696659_00703507
CI01000053_00678066_00685960.mRNA mRNA downstream 59575 677932 ~ 687806 (-) True CI01000053_00678066_00685960
CI01000053_00667421_00672829.mRNA mRNA downstream 72960 667075 ~ 674421 (-) True CI01000053_00667421_00672829
CI01000053_00797990_00802827.mRNA mRNA upstream 50088 797707 ~ 803060 (-) True CI01000053_00797990_00802827
CI01000053_00815725_00817893.mRNA mRNA upstream 67978 815597 ~ 817893 (-) True CI01000053_00815725_00817893
CI01000053_00830433_00864331.mRNA mRNA upstream 82579 830198 ~ 864373 (-) True CI01000053_00830433_00864331
CI01000053_00865420_00881846.mRNA mRNA upstream 117754 865373 ~ 881846 (-) True CI01000053_00865420_00881846
CI01000053_00956174_00961278.mRNA mRNA upstream 208390 956009 ~ 961278 (-) True CI01000053_00956174_00961278
TU255892 other downstream 200513 543647 ~ 546868 (-) True G225574
TU256158 other upstream 711976 1459595 ~ 1466732 (-) True G225812
TU257051 other upstream 1469829 2217448 ~ 2237396 (-) True G226536
TU257358 other upstream 1818273 2565892 ~ 2567072 (-) True G226826
TU257528 other upstream 2249098 2996717 ~ 2997268 (-) True G226963
TU257615 other upstream 2802714 3550333 ~ 3551978 (-) False CI01000053_03551506_03551965

Expression Profile