RNA id: TU255993



Basic Information


Item Value
RNA id TU255993
length 245
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G225668
representative True

Chromosome Information


Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 749251 ~ 749495 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGTCTTTCTTGCTCACAGCAGTGTGTCGTCTATGTATTGGTACCTGCTCTCCAGCAGCAGCAGTGTAGCAGATCTATTCAACCAAGACCAAACATATCAACATTGTCATCCATTACCATGCCAAACACTCCGAGAGTTGTCATGACAGAGGTTATATTAAAACTAAATAAGTGAATTAGTCTATTTCTTGATTTGTTGGTGCTGTAGTAGATCTAAACATCTCTATGTGTGGAAAATGAATGGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU255990 lncRNA downstream 1632 747381 ~ 747619 (-) True G225665
TU255941 lncRNA downstream 177994 571056 ~ 571257 (-) True G225622
TU255939 lncRNA downstream 193192 552476 ~ 556059 (-) True G225620
TU255884 lncRNA downstream 221721 526117 ~ 527530 (-) True G225570
TU255885 lncRNA downstream 223306 524494 ~ 525945 (-) True G225571
TU255876 lncRNA upstream 58672 808167 ~ 809734 (-) True G225563
TU255872 lncRNA upstream 64133 813628 ~ 814240 (-) True G225561
TU256003 lncRNA upstream 66909 816404 ~ 816668 (-) True G225678
TU256012 lncRNA upstream 157065 906560 ~ 907001 (-) True G225687
TU256015 lncRNA upstream 189090 938585 ~ 938904 (-) True G225690
CI01000053_00739813_00746803.mRNA mRNA downstream 2220 739662 ~ 747031 (-) True CI01000053_00739813_00746803
CI01000053_00733357_00737206.mRNA mRNA downstream 11924 733315 ~ 737327 (-) True CI01000053_00733357_00737206
CI01000053_00696659_00703507.mRNA mRNA downstream 45744 696362 ~ 703507 (-) True CI01000053_00696659_00703507
CI01000053_00678066_00685960.mRNA mRNA downstream 61445 677932 ~ 687806 (-) True CI01000053_00678066_00685960
CI01000053_00667421_00672829.mRNA mRNA downstream 74830 667075 ~ 674421 (-) True CI01000053_00667421_00672829
CI01000053_00797990_00802827.mRNA mRNA upstream 48212 797707 ~ 803060 (-) True CI01000053_00797990_00802827
CI01000053_00815725_00817893.mRNA mRNA upstream 66102 815597 ~ 817893 (-) True CI01000053_00815725_00817893
CI01000053_00830433_00864331.mRNA mRNA upstream 80703 830198 ~ 864373 (-) True CI01000053_00830433_00864331
CI01000053_00865420_00881846.mRNA mRNA upstream 115878 865373 ~ 881846 (-) True CI01000053_00865420_00881846
CI01000053_00956174_00961278.mRNA mRNA upstream 206514 956009 ~ 961278 (-) True CI01000053_00956174_00961278
TU255892 other downstream 202383 543647 ~ 546868 (-) True G225574
TU256158 other upstream 710100 1459595 ~ 1466732 (-) True G225812
TU257051 other upstream 1467953 2217448 ~ 2237396 (-) True G226536
TU257358 other upstream 1816397 2565892 ~ 2567072 (-) True G226826
TU257528 other upstream 2247222 2996717 ~ 2997268 (-) True G226963
TU257615 other upstream 2800838 3550333 ~ 3551978 (-) False CI01000053_03551506_03551965

Expression Profile