Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00018883 |
| length | 1001 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | XLOC_008279 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 5277761 ~ 5280100 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050896 | response to stimulus | biological_process |
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018755 | lncRNA | upstream | 21121 | 5256501 ~ 5256782 (+) | True | XLOC_008278 |
| TCONS_00018882 | lncRNA | upstream | 723475 | 4553896 ~ 4554428 (+) | True | XLOC_008271 |
| TCONS_00018754 | lncRNA | upstream | 745938 | 4528549 ~ 4531965 (+) | True | XLOC_008270 |
| TCONS_00018879 | lncRNA | upstream | 956888 | 4313091 ~ 4321015 (+) | False | XLOC_008269 |
| TCONS_00018884 | lncRNA | downstream | 189195 | 5468098 ~ 5470851 (+) | False | XLOC_008289 |
| TCONS_00018885 | lncRNA | downstream | 189457 | 5468360 ~ 5471508 (+) | True | XLOC_008289 |
| TCONS_00018886 | lncRNA | downstream | 562654 | 5841557 ~ 5853342 (+) | True | XLOC_008291 |
| TCONS_00018887 | lncRNA | downstream | 880106 | 6159009 ~ 6160503 (+) | True | XLOC_008297 |
| TCONS_00018756 | lncRNA | downstream | 1506746 | 6785649 ~ 6786055 (+) | True | XLOC_008304 |
| TCONS_00016652 | mRNA | upstream | 129110 | 5116179 ~ 5148793 (+) | False | XLOC_008277 |
| TCONS_00016653 | mRNA | upstream | 129110 | 5132439 ~ 5148793 (+) | True | XLOC_008277 |
| TCONS_00016650 | mRNA | upstream | 171732 | 5086338 ~ 5106171 (+) | False | XLOC_008276 |
| TCONS_00016651 | mRNA | upstream | 171848 | 5088210 ~ 5106055 (+) | True | XLOC_008276 |
| TCONS_00016649 | mRNA | upstream | 202920 | 5028608 ~ 5074983 (+) | True | XLOC_008275 |
| TCONS_00016655 | mRNA | downstream | 1955 | 5280858 ~ 5284248 (+) | True | XLOC_008280 |
| TCONS_00016656 | mRNA | downstream | 8800 | 5287703 ~ 5289199 (+) | True | XLOC_008281 |
| TCONS_00016657 | mRNA | downstream | 14882 | 5293785 ~ 5295023 (+) | True | XLOC_008282 |
| TCONS_00016658 | mRNA | downstream | 20501 | 5299404 ~ 5300815 (+) | True | XLOC_008283 |
| TCONS_00016659 | mRNA | downstream | 42709 | 5321612 ~ 5323546 (+) | True | XLOC_008284 |
| TCONS_00016634 | other | upstream | 1771480 | 3506309 ~ 3506423 (+) | True | XLOC_008259 |
| TCONS_00016623 | other | upstream | 2592197 | 2685055 ~ 2685706 (+) | True | XLOC_008246 |
| TCONS_00016622 | other | upstream | 2603313 | 2673935 ~ 2674590 (+) | True | XLOC_008245 |
| TCONS_00016611 | other | upstream | 2919278 | 2358511 ~ 2358625 (+) | True | XLOC_008239 |
| TCONS_00016606 | other | upstream | 3404125 | 1873658 ~ 1873778 (+) | True | XLOC_008236 |
| TCONS_00016665 | other | downstream | 576208 | 5855111 ~ 5855225 (+) | True | XLOC_008292 |
| TCONS_00016677 | other | downstream | 1280147 | 6559050 ~ 6559185 (+) | True | XLOC_008299 |
| TCONS_00016680 | other | downstream | 1399618 | 6678521 ~ 6727082 (+) | True | XLOC_008301 |
| TCONS_00016681 | other | downstream | 1491683 | 6770586 ~ 6772120 (+) | True | XLOC_008302 |
| TCONS_00016699 | other | downstream | 3403919 | 8682822 ~ 8682937 (+) | True | XLOC_008317 |
