Item | Value |
---|---|
RNA id | CI01000054_01879983_01965668.mRNA |
length | 10087 |
RNA type | mRNA |
GC content | 0.53 |
exon number | 58 |
gene id | CI01000054_01879983_01965668 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000054 |
NCBI id | null |
chromosome length | 13006764 |
location | 1879983 ~ 1966159 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
id | description |
---|---|
K08810 | TRIO; triple functional domain protein |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU261535 | lncRNA | upstream | 72678 | 1767423 ~ 1807305 (+) | False | G230462 |
TU261532 | lncRNA | upstream | 72678 | 1801712 ~ 1807305 (+) | False | G230462 |
TU261533 | lncRNA | upstream | 72678 | 1801712 ~ 1807305 (+) | True | G230462 |
TU261513 | lncRNA | upstream | 140649 | 1735842 ~ 1739334 (+) | True | G230449 |
TU260739 | lncRNA | upstream | 231029 | 1648295 ~ 1648954 (+) | True | CI01000054_01639395_01647833 |
TU261592 | lncRNA | downstream | 43843 | 2010002 ~ 2010436 (+) | True | G230496 |
TU261596 | lncRNA | downstream | 50115 | 2016274 ~ 2018368 (+) | True | G230500 |
TU261597 | lncRNA | downstream | 60716 | 2026875 ~ 2027102 (+) | False | CI01000054_02024879_02026284 |
TU261598 | lncRNA | downstream | 60995 | 2027154 ~ 2027615 (+) | True | CI01000054_02024879_02026284 |
TU261571 | lncRNA | downstream | 115866 | 2082025 ~ 2082459 (+) | True | G230475 |
CI01000054_01871659_01875753.mRNA | mRNA | upstream | 3773 | 1871548 ~ 1876210 (+) | True | CI01000054_01871659_01875753 |
CI01000054_01725792_01726688.mRNA | mRNA | upstream | 153243 | 1725627 ~ 1726740 (+) | False | CI01000054_01725792_01726688 |
CI01000054_01706858_01711137.mRNA | mRNA | upstream | 168733 | 1705732 ~ 1711250 (+) | True | CI01000054_01706858_01711137 |
CI01000054_01650242_01665628.mRNA | mRNA | upstream | 213868 | 1650242 ~ 1666115 (+) | False | CI01000054_01650242_01665628 |
CI01000054_01639395_01647833.mRNA | mRNA | upstream | 231103 | 1639395 ~ 1648880 (+) | False | CI01000054_01639395_01647833 |
CI01000054_02024879_02026284.mRNA | mRNA | downstream | 58720 | 2024879 ~ 2027579 (+) | False | CI01000054_02024879_02026284 |
CI01000054_02096054_02105211.mRNA | mRNA | downstream | 129895 | 2096054 ~ 2105265 (+) | True | CI01000054_02096054_02105211 |
CI01000054_02195667_02196307.mRNA | mRNA | downstream | 229508 | 2195667 ~ 2196853 (+) | True | CI01000054_02195667_02196307 |
CI01000054_02225261_02226820.mRNA | mRNA | downstream | 258368 | 2224527 ~ 2227071 (+) | True | CI01000054_02225261_02226820 |
CI01000054_02239241_02261796.mRNA | mRNA | downstream | 272165 | 2238324 ~ 2261858 (+) | False | CI01000054_02239241_02261796 |
TU261003 | other | upstream | 153190 | 1725669 ~ 1726793 (+) | True | CI01000054_01725792_01726688 |
TU260765 | other | upstream | 218418 | 1650960 ~ 1661565 (+) | True | CI01000054_01650242_01665628 |
TU260728 | other | upstream | 297914 | 1578435 ~ 1582069 (+) | True | G229750 |
TU260932 | other | upstream | 472853 | 1397080 ~ 1407130 (+) | False | G229936 |
TU260738 | other | upstream | 606233 | 1266350 ~ 1273750 (+) | True | G229760 |
TU261855 | other | downstream | 323672 | 2289831 ~ 2304382 (+) | True | CI01000054_02289802_02330591 |
TU261835 | other | downstream | 1112343 | 3078502 ~ 3087392 (+) | True | G230689 |
TU262576 | other | downstream | 1942292 | 3908451 ~ 3913546 (+) | True | CI01000054_03848427_03914231 |
TU263121 | other | downstream | 2440993 | 4407152 ~ 4450730 (+) | True | G231863 |
TU263797 | other | downstream | 3656856 | 5623015 ~ 5623101 (+) | True | G232485 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
zebrafish (Danio rerio) | TCONS_00029544 | False | 9945 | mRNA | 0.54 | 58 | NC_007130.7 | 41841183 ~ 42045372 (-) |
bowfin (Amia calva) | AMCG00002554 | True | 10171 | mRNA | 0.53 | 56 | CM030136.1 | 18900273 ~ 18978957 (-) |