Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU263819 |
| length | 224 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G232499 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 5627572 ~ 5627795 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0008766 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity | molecular_function |
| id | description |
|---|---|
| K11973 | RNF19B; E3 ubiquitin-protein ligase RNF19B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU263779 | lncRNA | upstream | 153239 | 5474045 ~ 5474333 (+) | True | G232467 |
| TU263754 | lncRNA | upstream | 208703 | 5418632 ~ 5418869 (+) | True | G232443 |
| TU263682 | lncRNA | upstream | 226460 | 5400368 ~ 5401112 (+) | True | G232379 |
| TU263664 | lncRNA | upstream | 269900 | 5357241 ~ 5357672 (+) | True | G232368 |
| TU263585 | lncRNA | upstream | 366810 | 5259996 ~ 5260762 (+) | False | G232293 |
| TU263823 | lncRNA | downstream | 11776 | 5694337 ~ 5696013 (+) | True | G232503 |
| TU263839 | lncRNA | downstream | 155722 | 5838283 ~ 5838874 (+) | True | G232519 |
| TU263841 | lncRNA | downstream | 177059 | 5859620 ~ 5859877 (+) | True | G232521 |
| TU263846 | lncRNA | downstream | 184306 | 5866867 ~ 5867089 (+) | True | G232526 |
| TU263850 | lncRNA | downstream | 187637 | 5870198 ~ 5870423 (+) | True | G232530 |
| CI01000054_05595391_05599507.mRNA | mRNA | upstream | 27877 | 5594953 ~ 5599695 (+) | True | CI01000054_05595391_05599507 |
| CI01000054_05579068_05592326.mRNA | mRNA | upstream | 35069 | 5579068 ~ 5592503 (+) | True | CI01000054_05579068_05592326 |
| CI01000054_05567094_05576916.mRNA | mRNA | upstream | 50549 | 5567094 ~ 5577023 (+) | True | CI01000054_05567094_05576916 |
| CI01000054_05538535_05543989.mRNA | mRNA | upstream | 82538 | 5537408 ~ 5545034 (+) | True | CI01000054_05538535_05543989 |
| CI01000054_05409518_05413525.mRNA | mRNA | upstream | 213585 | 5409302 ~ 5413987 (+) | True | CI01000054_05409518_05413525 |
| CI01000054_05696772_05708538.mRNA | mRNA | downstream | 13788 | 5696349 ~ 5708637 (+) | False | CI01000054_05696772_05708538 |
| CI01000054_05713420_05771550.mRNA | mRNA | downstream | 30859 | 5713420 ~ 5771745 (+) | True | CI01000054_05713420_05771550 |
| CI01000054_05772612_05808901.mRNA | mRNA | downstream | 89891 | 5772452 ~ 5809366 (+) | True | CI01000054_05772612_05808901 |
| CI01000054_05813838_05819498.mRNA | mRNA | downstream | 130203 | 5812764 ~ 5819740 (+) | True | CI01000054_05813838_05819498 |
| CI01000054_05825039_05827325.mRNA | mRNA | downstream | 141245 | 5823806 ~ 5827378 (+) | True | CI01000054_05825039_05827325 |
| TU263797 | other | upstream | 2897 | 5623015 ~ 5623101 (+) | True | G232485 |
| TU263121 | other | upstream | 1176842 | 4407152 ~ 4450730 (+) | True | G231863 |
| TU262576 | other | upstream | 1714026 | 3908451 ~ 3913546 (+) | True | CI01000054_03848427_03914231 |
| TU261835 | other | upstream | 2540180 | 3078502 ~ 3087392 (+) | True | G230689 |
| TU261855 | other | upstream | 3323190 | 2289831 ~ 2304382 (+) | True | CI01000054_02289802_02330591 |
| TU263881 | other | downstream | 311099 | 5993660 ~ 6041863 (+) | True | G232558 |
| TU263932 | other | downstream | 621746 | 6304307 ~ 6304441 (+) | True | G232608 |
| TU264006 | other | downstream | 692289 | 6374850 ~ 6375894 (+) | True | G232659 |
| TU264264 | other | downstream | 1205351 | 6887912 ~ 6888503 (+) | False | G232870 |
| TU264265 | other | downstream | 1205553 | 6888114 ~ 6888503 (+) | True | G232870 |
