RNA id: TU261355


Basic Information

Item Value
RNA id TU261355
length 326
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G230311
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 860921 ~ 861246 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAACAATAAAATCTGGTGATGATAATGAATAAATTGCATGTGTCTGTGTCTGCCACTGAATGATTTAAAGATTTTTAAAGTCCCCCTGAAATCAAAACTTAAGTTTTTTAGCATTTAGTATTAATATGTTAGCCTTAGTGTTATGAATAAGCTGGTGTGTTCCAAAACAATGACAAAATTCGCATTTAGGAGATATAAGCATTCAAAACTTACAGTCTCTCACTTCCGCTAAAATGGATAAAGGATTTTCATGACATCACATCGCACTTCAGCTTCTCATCAAATCTTCTGTCCAATCAAATGCTCTCTAGAATCTGAAGTCCCGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU261352 lncRNA downstream 3360 857336 ~ 857561 (-) True G230308
TU261345 lncRNA downstream 7148 853442 ~ 853773 (-) True G230305
TU261168 lncRNA downstream 190410 657681 ~ 670511 (-) True G230150
TU261103 lncRNA downstream 308012 474111 ~ 552909 (-) False G230092
TU261102 lncRNA downstream 333082 474111 ~ 527839 (-) False G230092
TU261165 lncRNA upstream 2712 863958 ~ 886225 (-) True G230148
TU261161 lncRNA upstream 24008 885254 ~ 888159 (-) False G230145
TU261162 lncRNA upstream 24008 885254 ~ 886094 (-) False G230145
TU261160 lncRNA upstream 24556 885802 ~ 888159 (-) True G230145
TU261373 lncRNA upstream 53889 915135 ~ 915357 (-) True G230328
CI01000054_00195914_00197098.mRNA mRNA downstream 663702 195226 ~ 197219 (-) True CI01000054_00195914_00197098
CI01000054_00188121_00191695.mRNA mRNA downstream 668963 187797 ~ 191958 (-) True CI01000054_00188121_00191695
CI01000054_00147623_00148143.mRNA mRNA downstream 712666 147591 ~ 148255 (-) True CI01000054_00147623_00148143
CI01000054_00094396_00130159.mRNA mRNA downstream 730736 94260 ~ 130185 (-) True CI01000054_00094396_00130159
CI01000054_00888859_00895223.mRNA mRNA upstream 27202 888448 ~ 895223 (-) True CI01000054_00888859_00895223
CI01000054_00898039_00902381.mRNA mRNA upstream 36296 897542 ~ 902381 (-) True CI01000054_00898039_00902381
CI01000054_00924015_00926256.mRNA mRNA upstream 62488 923734 ~ 926256 (-) True CI01000054_00924015_00926256
CI01000054_00929337_00955240.mRNA mRNA upstream 67886 929132 ~ 955674 (-) True CI01000054_00929337_00955240
CI01000054_00965111_00970121.mRNA mRNA upstream 103396 964642 ~ 970121 (-) True CI01000054_00965111_00970121
TU261218 other upstream 324287 1185533 ~ 1230135 (-) False G230178
TU261209 other upstream 365177 1226423 ~ 1230135 (-) False G230178
TU261213 other upstream 365177 1226423 ~ 1230135 (-) False G230178
TU262094 other upstream 1975991 2837237 ~ 2837682 (-) True G230923
TU262064 other upstream 1992895 2854141 ~ 2859545 (-) False G230906

Expression Profile