RNA id: TU261388



Basic Information


Item Value
RNA id TU261388
length 209
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G230342
representative True

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1029621 ~ 1029829 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATTGGGTAGGAATAAGGGACATACGGTCATGCAGAATAAGGCATTAAAGGATTAGTTCACTTTAAAATAAAAATTACCCCAAGCTTTACTCACCCTCAAGCCATCCTAGGTGTATATGACTTTCTTCTTTCTGATGAACACAATCGGAGTTATATATTAATAAATATCCTGACATGTCCAAGCTTTATAATGGTAGTGAATGGGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU261387 lncRNA downstream 8741 1020674 ~ 1020880 (-) True G230341
TU261382 lncRNA downstream 10480 1015723 ~ 1019141 (-) True G230336
TU261380 lncRNA downstream 24119 1005266 ~ 1005502 (-) True G230335
TU261278 lncRNA downstream 33170 993392 ~ 996451 (-) True G230238
TU261373 lncRNA downstream 114264 915135 ~ 915357 (-) True G230328
TU261229 lncRNA upstream 25721 1055550 ~ 1057442 (-) True G230189
TU261389 lncRNA upstream 31743 1061572 ~ 1061892 (-) True G230343
TU261392 lncRNA upstream 32784 1062613 ~ 1062914 (-) True G230344
TU261394 lncRNA upstream 33932 1063761 ~ 1063961 (-) True G230346
TU261404 lncRNA upstream 81437 1111266 ~ 1111518 (-) True G230356
CI01000054_00979998_00989171.mRNA mRNA downstream 40450 979998 ~ 989171 (-) True CI01000054_00979998_00989171
CI01000054_00974025_00979306.mRNA mRNA downstream 50315 973900 ~ 979306 (-) True CI01000054_00974025_00979306
CI01000054_00965111_00970121.mRNA mRNA downstream 59500 964642 ~ 970121 (-) True CI01000054_00965111_00970121
CI01000054_00929337_00955240.mRNA mRNA downstream 73947 929132 ~ 955674 (-) True CI01000054_00929337_00955240
CI01000054_00924015_00926256.mRNA mRNA downstream 103365 923734 ~ 926256 (-) True CI01000054_00924015_00926256
CI01000054_01115294_01116274.mRNA mRNA upstream 84864 1114693 ~ 1116822 (-) True CI01000054_01115294_01116274
CI01000054_01151083_01156699.mRNA mRNA upstream 120895 1150724 ~ 1158172 (-) True CI01000054_01151083_01156699
CI01000054_01203148_01209012.mRNA mRNA upstream 173076 1202905 ~ 1209135 (-) True CI01000054_01203148_01209012
CI01000054_01246516_01250511.mRNA mRNA upstream 215052 1244881 ~ 1251249 (-) True CI01000054_01246516_01250511
CI01000054_01257527_01259314.mRNA mRNA upstream 227698 1257527 ~ 1259314 (-) True CI01000054_01257527_01259314
TU261218 other upstream 155704 1185533 ~ 1230135 (-) False G230178
TU261209 other upstream 196594 1226423 ~ 1230135 (-) False G230178
TU261213 other upstream 196594 1226423 ~ 1230135 (-) False G230178
TU262094 other upstream 1807408 2837237 ~ 2837682 (-) True G230923
TU262064 other upstream 1824312 2854141 ~ 2859545 (-) False G230906

Expression Profile