RNA id: TU264022



Basic Information


Item Value
RNA id TU264022
length 229
lncRNA type antisense_over
GC content 0.55
exon number 2
gene id G232674
representative True

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6429131 ~ 6429432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGTGCTGCCGCAGTACGGCCTCTGGCCCATGCTCATGCTCAGGTGAGGTCGCAGCACCGGTCACGTGATCCAAGTCATCCAGCAGGACCACTGAGGGTTGTCTCCAAACTGCCTGCTCGAAAACCTCTTCCAACCTCTGTCTGATTGTGTCTGCTCTCTTGCCTTTCAGTGCCTTGCAGTCCACAACTTGAATGTGGGCATCCAGCTCTTCACTGGCTTTTCGACACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264012 lncRNA upstream 12920 6415663 ~ 6416211 (+) True G232664
TU263821 lncRNA upstream 82498 5918059 ~ 6346633 (+) True G232501
TU263987 lncRNA upstream 142052 6286265 ~ 6287079 (+) True G232648
TU263930 lncRNA upstream 293102 6134517 ~ 6136029 (+) True G232606
TU263865 lncRNA upstream 534164 5894748 ~ 5894967 (+) True G232545
TU264032 lncRNA downstream 22426 6451858 ~ 6452068 (+) True G232684
TU264037 lncRNA downstream 30449 6459881 ~ 6460125 (+) True G232689
TU264039 lncRNA downstream 33595 6463027 ~ 6463256 (+) True G232691
TU264082 lncRNA downstream 103589 6533021 ~ 6533230 (+) True G232719
TU264084 lncRNA downstream 108547 6537979 ~ 6538207 (+) True G232721
CI01000054_06411594_06411984.mRNA mRNA upstream 16610 6411594 ~ 6412521 (+) True CI01000054_06411594_06411984
CI01000054_06305908_06312122.mRNA mRNA upstream 116968 6305908 ~ 6312163 (+) False CI01000054_06305908_06312122
CI01000054_06292147_06297237.mRNA mRNA upstream 131571 6291976 ~ 6297560 (+) True CI01000054_06292147_06297237
CI01000054_05989042_05989389.mRNA mRNA upstream 439336 5989042 ~ 5989795 (+) True CI01000054_05989042_05989389
CI01000054_05957906_05981499.mRNA mRNA upstream 446909 5957399 ~ 5982222 (+) True CI01000054_05957906_05981499
CI01000054_06434217_06435680.mRNA mRNA downstream 4324 6433756 ~ 6435680 (+) True CI01000054_06434217_06435680
CI01000054_06437628_06441214.mRNA mRNA downstream 8196 6437628 ~ 6441481 (+) True CI01000054_06437628_06441214
CI01000054_06756071_06757443.mRNA mRNA downstream 326377 6755809 ~ 6757514 (+) True CI01000054_06756071_06757443
CI01000054_06759472_06761310.mRNA mRNA downstream 329379 6758811 ~ 6761310 (+) True CI01000054_06759472_06761310
CI01000054_06789505_06789810.mRNA mRNA downstream 358930 6788362 ~ 6789946 (+) True CI01000054_06789505_06789810
TU264006 other upstream 53237 6374850 ~ 6375894 (+) True G232659
TU263932 other upstream 122271 6304307 ~ 6304441 (+) True G232608
TU263881 other upstream 387268 5993660 ~ 6041863 (+) True G232558
TU263797 other upstream 804456 5623015 ~ 5623101 (+) True G232485
TU263121 other upstream 1978401 4407152 ~ 4450730 (+) True G231863
TU264264 other downstream 458480 6887912 ~ 6888503 (+) False G232870
TU264265 other downstream 458682 6888114 ~ 6888503 (+) True G232870
TU264435 other downstream 1138091 7567523 ~ 7609893 (+) True G233024
TU264744 other downstream 1875167 8304599 ~ 8304949 (+) True G233306
TU264679 other downstream 1876505 8305937 ~ 8306053 (+) True G233242

Expression Profile