RNA id: TU265061


Basic Information

Item Value
RNA id TU265061
length 202
lncRNA type antisense_over
GC content 0.34
exon number 1
gene id G233592
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6437702 ~ 6437903 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTCAGATGGCAGACTCGACAGATTATTGTTATTCAACTTTAATACAACAATCCATGTAAGCCTCTCAAAAACTTCTGGAAGAAGTGTAATTTTCCTAGAACTTAAATTAAGCGAATTTGATTTCGTTTTTAAAGCTCTGATAATTGAATCATTAGCCATTTGACAATGACATCGTCACCTTGAACATTCCCTACGTTTCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265055 lncRNA downstream 1271 6434748 ~ 6436431 (-) True G233588
TU265059 lncRNA downstream 14621 6422781 ~ 6423081 (-) True G233590
TU265049 lncRNA downstream 18844 6418605 ~ 6418858 (-) True G233585
TU265045 lncRNA downstream 23994 6413083 ~ 6413708 (-) True G233581
TU264992 lncRNA downstream 112161 6317321 ~ 6325541 (-) True G233539
TU265062 lncRNA upstream 691 6438594 ~ 6438880 (-) True G233593
TU265063 lncRNA upstream 3202 6441105 ~ 6441497 (-) True G233594
TU265064 lncRNA upstream 3751 6441654 ~ 6441865 (-) True G233595
TU265070 lncRNA upstream 12779 6450682 ~ 6450900 (-) True G233601
TU265077 lncRNA upstream 20275 6458178 ~ 6458396 (-) True G233608
CI01000054_06422150_06433402.mRNA mRNA downstream 4013 6421808 ~ 6433689 (-) True CI01000054_06422150_06433402
CI01000054_06321499_06337371.mRNA mRNA downstream 99935 6321269 ~ 6337767 (-) True CI01000054_06321499_06337371
CI01000054_06283619_06286512.mRNA mRNA downstream 151026 6283319 ~ 6286676 (-) False CI01000054_06283619_06286512
CI01000054_06242813_06258348.mRNA mRNA downstream 179354 6242741 ~ 6258348 (-) True CI01000054_06242813_06258348
CI01000054_06222549_06234979.mRNA mRNA downstream 202630 6222467 ~ 6235072 (-) True CI01000054_06222549_06234979
CI01000054_06469564_06492881.mRNA mRNA upstream 30949 6468852 ~ 6492881 (-) True CI01000054_06469564_06492881
CI01000054_06503408_06508723.mRNA mRNA upstream 65330 6503233 ~ 6510068 (-) True CI01000054_06503408_06508723
CI01000054_06629482_06641861.mRNA mRNA upstream 191402 6629305 ~ 6642160 (-) False CI01000054_06629482_06641861
CI01000054_06830485_06831336.mRNA mRNA upstream 391089 6828992 ~ 6831336 (-) True CI01000054_06830485_06831336
CI01000054_06835747_06861855.mRNA mRNA upstream 396517 6834420 ~ 6863079 (-) True CI01000054_06835747_06861855
TU263564 other downstream 1228462 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 1765469 4672197 ~ 4672233 (-) True G231958
TU263225 other downstream 1765469 4672197 ~ 4672233 (-) True G231958
TU262888 other downstream 2454879 3981847 ~ 3982823 (-) True G231645
TU262068 other downstream 3374359 3057648 ~ 3063343 (-) True G230908
TU265088 other upstream 190179 6649149 ~ 6654013 (-) True G233619
TU265381 other upstream 727532 7171325 ~ 7171673 (-) True G233891
TU266788 other upstream 2810136 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 3045244 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 3045449 9485215 ~ 9485318 (-) False G235290

Expression Profile