RNA id: TU265070


Basic Information

Item Value
RNA id TU265070
length 219
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G233601
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6450682 ~ 6450900 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGAACCATCAGGGAGTAATGGGGAAAACAGACCCATATTACTGAGACACAGACAGTAGACGGCACCTACACTGGGATGGTCAAGACATTATGCTGACTGGCAAAAATGACATACGACACTTCCACGAGCAAAGGAAACATTTATAACAAATGTAGTGCTATTTTTAAACAAATTTTAAAGGAACATTTCACTTATATAAGTGTAAAAGTCAACAGTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265064 lncRNA downstream 8817 6441654 ~ 6441865 (-) True G233595
TU265063 lncRNA downstream 9185 6441105 ~ 6441497 (-) True G233594
TU265062 lncRNA downstream 11802 6438594 ~ 6438880 (-) True G233593
TU265061 lncRNA downstream 12779 6437702 ~ 6437903 (-) True G233592
TU265055 lncRNA downstream 14251 6434748 ~ 6436431 (-) True G233588
TU265077 lncRNA upstream 7278 6458178 ~ 6458396 (-) True G233608
TU265041 lncRNA upstream 62590 6513490 ~ 6523980 (-) True G233577
TU265151 lncRNA upstream 156932 6607832 ~ 6608083 (-) True G233677
TU265152 lncRNA upstream 157608 6608508 ~ 6608864 (-) True G233678
TU265159 lncRNA upstream 168774 6619674 ~ 6619899 (-) True G233685
CI01000054_06422150_06433402.mRNA mRNA downstream 16993 6421808 ~ 6433689 (-) True CI01000054_06422150_06433402
CI01000054_06321499_06337371.mRNA mRNA downstream 112915 6321269 ~ 6337767 (-) True CI01000054_06321499_06337371
CI01000054_06283619_06286512.mRNA mRNA downstream 164006 6283319 ~ 6286676 (-) False CI01000054_06283619_06286512
CI01000054_06242813_06258348.mRNA mRNA downstream 192334 6242741 ~ 6258348 (-) True CI01000054_06242813_06258348
CI01000054_06222549_06234979.mRNA mRNA downstream 215610 6222467 ~ 6235072 (-) True CI01000054_06222549_06234979
CI01000054_06469564_06492881.mRNA mRNA upstream 17952 6468852 ~ 6492881 (-) True CI01000054_06469564_06492881
CI01000054_06503408_06508723.mRNA mRNA upstream 52333 6503233 ~ 6510068 (-) True CI01000054_06503408_06508723
CI01000054_06629482_06641861.mRNA mRNA upstream 178405 6629305 ~ 6642160 (-) False CI01000054_06629482_06641861
CI01000054_06830485_06831336.mRNA mRNA upstream 378092 6828992 ~ 6831336 (-) True CI01000054_06830485_06831336
CI01000054_06835747_06861855.mRNA mRNA upstream 383520 6834420 ~ 6863079 (-) True CI01000054_06835747_06861855
TU263564 other downstream 1241442 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 1778449 4672197 ~ 4672233 (-) True G231958
TU263225 other downstream 1778449 4672197 ~ 4672233 (-) True G231958
TU262888 other downstream 2467859 3981847 ~ 3982823 (-) True G231645
TU262068 other downstream 3387339 3057648 ~ 3063343 (-) True G230908
TU265088 other upstream 177182 6649149 ~ 6654013 (-) True G233619
TU265381 other upstream 714535 7171325 ~ 7171673 (-) True G233891
TU266788 other upstream 2797139 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 3032247 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 3032452 9485215 ~ 9485318 (-) False G235290

Expression Profile