RNA id: TU264115


Basic Information

Item Value
RNA id TU264115
length 223
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G232752
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6615686 ~ 6615908 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTCAATCTCCCACCAATCTGTCCCACTATAATATCACAATGCACTAAACATCTAGAATGACCATTGAAAAGAAAAAGCAAAGAAATCAGAGGATGAAAGACATCCCTTCATAATTTGAGCCATTCTTTGAGAGAATATCTCTCGCGTTGACCCCTACTGACCCGCAGGCCATGCCGGGGTCCCTCACTGGTCTTGTTGTAGGGAGGGATGGCGGCATCTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264103 lncRNA upstream 22196 6593283 ~ 6593490 (+) True G232740
TU264102 lncRNA upstream 22461 6592934 ~ 6593225 (+) True G232739
TU264099 lncRNA upstream 28974 6586285 ~ 6586712 (+) True G232736
TU264098 lncRNA upstream 31765 6583631 ~ 6583921 (+) True G232735
TU264091 lncRNA upstream 60047 6555408 ~ 6555639 (+) True G232728
TU264118 lncRNA downstream 2670 6618578 ~ 6618811 (+) True G232755
TU264119 lncRNA downstream 5479 6621387 ~ 6621623 (+) True G232756
TU264121 lncRNA downstream 7007 6622915 ~ 6623217 (+) True G232758
TU264123 lncRNA downstream 8928 6624836 ~ 6625065 (+) True G232760
TU264124 lncRNA downstream 9475 6625383 ~ 6625685 (+) True G232761
CI01000054_06437628_06441214.mRNA mRNA upstream 174205 6437628 ~ 6441481 (+) True CI01000054_06437628_06441214
CI01000054_06434217_06435680.mRNA mRNA upstream 180006 6433756 ~ 6435680 (+) True CI01000054_06434217_06435680
CI01000054_06411594_06411984.mRNA mRNA upstream 203165 6411594 ~ 6412521 (+) True CI01000054_06411594_06411984
CI01000054_06305908_06312122.mRNA mRNA upstream 303523 6305908 ~ 6312163 (+) False CI01000054_06305908_06312122
CI01000054_06292147_06297237.mRNA mRNA upstream 318126 6291976 ~ 6297560 (+) True CI01000054_06292147_06297237
CI01000054_06756071_06757443.mRNA mRNA downstream 139901 6755809 ~ 6757514 (+) True CI01000054_06756071_06757443
CI01000054_06759472_06761310.mRNA mRNA downstream 142903 6758811 ~ 6761310 (+) True CI01000054_06759472_06761310
CI01000054_06789505_06789810.mRNA mRNA downstream 172454 6788362 ~ 6789946 (+) True CI01000054_06789505_06789810
CI01000054_06795526_06796596.mRNA mRNA downstream 179618 6795526 ~ 6796644 (+) True CI01000054_06795526_06796596
CI01000054_06865381_06869404.mRNA mRNA downstream 249473 6865381 ~ 6869942 (+) True CI01000054_06865381_06869404
TU264006 other upstream 239792 6374850 ~ 6375894 (+) True G232659
TU263932 other upstream 308826 6304307 ~ 6304441 (+) True G232608
TU263881 other upstream 573823 5993660 ~ 6041863 (+) True G232558
TU263797 other upstream 991011 5623015 ~ 5623101 (+) True G232485
TU263121 other upstream 2164956 4407152 ~ 4450730 (+) True G231863
TU264264 other downstream 272004 6887912 ~ 6888503 (+) False G232870
TU264265 other downstream 272206 6888114 ~ 6888503 (+) True G232870
TU264435 other downstream 951615 7567523 ~ 7609893 (+) True G233024
TU264744 other downstream 1688691 8304599 ~ 8304949 (+) True G233306
TU264679 other downstream 1690029 8305937 ~ 8306053 (+) True G233242

Expression Profile