RNA id: TU264118



Basic Information


Item Value
RNA id TU264118
length 234
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G232755
representative True

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6618578 ~ 6618811 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGCAAACAGAGAGAGAGGAGGAAAAGAATGGATGCAAATAGACAATACGTAGTGTCATAGCTCACCTGTTGAACACCTGCGATGTGTTGTCCAAAACACACAGATACATATTTCAAAAACTGATTCTAAACTGCTTAATATTTATTCGTCTGTGTTTACCATCCTTTTCCCTGTTATAGATGAATGCAGCAGCACTCTTAAACAAACTCATCATTCACATGAATCAGATTTCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264115 lncRNA upstream 2670 6615686 ~ 6615908 (+) True G232752
TU264103 lncRNA upstream 25088 6593283 ~ 6593490 (+) True G232740
TU264102 lncRNA upstream 25353 6592934 ~ 6593225 (+) True G232739
TU264099 lncRNA upstream 31866 6586285 ~ 6586712 (+) True G232736
TU264098 lncRNA upstream 34657 6583631 ~ 6583921 (+) True G232735
TU264119 lncRNA downstream 2576 6621387 ~ 6621623 (+) True G232756
TU264121 lncRNA downstream 4104 6622915 ~ 6623217 (+) True G232758
TU264123 lncRNA downstream 6025 6624836 ~ 6625065 (+) True G232760
TU264124 lncRNA downstream 6572 6625383 ~ 6625685 (+) True G232761
TU264125 lncRNA downstream 7103 6625914 ~ 6626226 (+) True G232762
CI01000054_06437628_06441214.mRNA mRNA upstream 177097 6437628 ~ 6441481 (+) True CI01000054_06437628_06441214
CI01000054_06434217_06435680.mRNA mRNA upstream 182898 6433756 ~ 6435680 (+) True CI01000054_06434217_06435680
CI01000054_06411594_06411984.mRNA mRNA upstream 206057 6411594 ~ 6412521 (+) True CI01000054_06411594_06411984
CI01000054_06305908_06312122.mRNA mRNA upstream 306415 6305908 ~ 6312163 (+) False CI01000054_06305908_06312122
CI01000054_06292147_06297237.mRNA mRNA upstream 321018 6291976 ~ 6297560 (+) True CI01000054_06292147_06297237
CI01000054_06756071_06757443.mRNA mRNA downstream 136998 6755809 ~ 6757514 (+) True CI01000054_06756071_06757443
CI01000054_06759472_06761310.mRNA mRNA downstream 140000 6758811 ~ 6761310 (+) True CI01000054_06759472_06761310
CI01000054_06789505_06789810.mRNA mRNA downstream 169551 6788362 ~ 6789946 (+) True CI01000054_06789505_06789810
CI01000054_06795526_06796596.mRNA mRNA downstream 176715 6795526 ~ 6796644 (+) True CI01000054_06795526_06796596
CI01000054_06865381_06869404.mRNA mRNA downstream 246570 6865381 ~ 6869942 (+) True CI01000054_06865381_06869404
TU264006 other upstream 242684 6374850 ~ 6375894 (+) True G232659
TU263932 other upstream 311718 6304307 ~ 6304441 (+) True G232608
TU263881 other upstream 576715 5993660 ~ 6041863 (+) True G232558
TU263797 other upstream 993903 5623015 ~ 5623101 (+) True G232485
TU263121 other upstream 2167848 4407152 ~ 4450730 (+) True G231863
TU264264 other downstream 269101 6887912 ~ 6888503 (+) False G232870
TU264265 other downstream 269303 6888114 ~ 6888503 (+) True G232870
TU264435 other downstream 948712 7567523 ~ 7609893 (+) True G233024
TU264744 other downstream 1685788 8304599 ~ 8304949 (+) True G233306
TU264679 other downstream 1687126 8305937 ~ 8306053 (+) True G233242

Expression Profile