RNA id: TU265163


Basic Information

Item Value
RNA id TU265163
length 284
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G233689
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6624821 ~ 6625104 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGCTTTCGATCCAAATGTAAGTGTTAGGAGTCAAGTCTGAAATTAACAGCTCAGACTTGTGCAATGCTGCACTTAAATTGATGATTTATGCAAGTGCTCTGTTATAAGTGTTTCTTTTTTTCAAAACCTTTGGGCAAGACTCCAAGCTGATCTGTTTAACTTTTGATAAACGTTGTTATGCTCTGTACTATGCTGCATTATATTCAAAATAATTAGCAATGAGCACTATTTTTTATTTATTTTGTGTGTTTTCCTTTGTAGATCCCCGTTTTAAATAACTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265159 lncRNA downstream 4922 6619674 ~ 6619899 (-) True G233685
TU265152 lncRNA downstream 15957 6608508 ~ 6608864 (-) True G233678
TU265151 lncRNA downstream 16738 6607832 ~ 6608083 (-) True G233677
TU265041 lncRNA downstream 100841 6513490 ~ 6523980 (-) True G233577
TU265077 lncRNA downstream 166425 6458178 ~ 6458396 (-) True G233608
TU265161 lncRNA upstream 684 6625788 ~ 6625906 (-) True G233687
TU265168 lncRNA upstream 35436 6660540 ~ 6660745 (-) True G233694
TU265178 lncRNA upstream 46248 6671352 ~ 6671552 (-) True G233704
TU265183 lncRNA upstream 56375 6681479 ~ 6681940 (-) True G233709
TU265186 lncRNA upstream 58748 6683852 ~ 6684871 (-) True G233712
CI01000054_06503408_06508723.mRNA mRNA downstream 114753 6503233 ~ 6510068 (-) True CI01000054_06503408_06508723
CI01000054_06469564_06492881.mRNA mRNA downstream 131940 6468852 ~ 6492881 (-) True CI01000054_06469564_06492881
CI01000054_06422150_06433402.mRNA mRNA downstream 191132 6421808 ~ 6433689 (-) True CI01000054_06422150_06433402
CI01000054_06321499_06337371.mRNA mRNA downstream 287054 6321269 ~ 6337767 (-) True CI01000054_06321499_06337371
CI01000054_06283619_06286512.mRNA mRNA downstream 338145 6283319 ~ 6286676 (-) False CI01000054_06283619_06286512
CI01000054_06629482_06641861.mRNA mRNA upstream 4201 6629305 ~ 6642160 (-) False CI01000054_06629482_06641861
CI01000054_06830485_06831336.mRNA mRNA upstream 203888 6828992 ~ 6831336 (-) True CI01000054_06830485_06831336
CI01000054_06835747_06861855.mRNA mRNA upstream 209316 6834420 ~ 6863079 (-) True CI01000054_06835747_06861855
CI01000054_06874039_06875193.mRNA mRNA upstream 248216 6873320 ~ 6875309 (-) True CI01000054_06874039_06875193
CI01000054_06895032_06942103.mRNA mRNA upstream 269724 6894828 ~ 6942362 (-) True CI01000054_06895032_06942103
TU263564 other downstream 1415581 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 1952588 4672197 ~ 4672233 (-) True G231958
TU263225 other downstream 1952588 4672197 ~ 4672233 (-) True G231958
TU262888 other downstream 2641998 3981847 ~ 3982823 (-) True G231645
TU262068 other downstream 3561478 3057648 ~ 3063343 (-) True G230908
TU265088 other upstream 2978 6649149 ~ 6654013 (-) True G233619
TU265381 other upstream 540331 7171325 ~ 7171673 (-) True G233891
TU266788 other upstream 2622935 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 2858043 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 2858248 9485215 ~ 9485318 (-) False G235290

Expression Profile