RNA id: TU265168


Basic Information

Item Value
RNA id TU265168
length 206
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G233694
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6660540 ~ 6660745 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTAATCCAGAATGGCAGCACAGCTGAAAGATTTGTTTGAGCTGCGCCCTCTACTGTACAGACATAAATATGCATTTCCTTCAGCCTGATGCTTATTTATTTCACTTTTGGTGTGAAAGAGCCTTAACATTTGCCAAAAATATAACTTTTTTGTTGTTATTAATGTGAGAAAAGTAACGCAAAAGCAATGAAACACATTACTTTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265161 lncRNA downstream 34634 6625788 ~ 6625906 (-) True G233687
TU265163 lncRNA downstream 35436 6624821 ~ 6625104 (-) True G233689
TU265159 lncRNA downstream 40641 6619674 ~ 6619899 (-) True G233685
TU265152 lncRNA downstream 51676 6608508 ~ 6608864 (-) True G233678
TU265151 lncRNA downstream 52457 6607832 ~ 6608083 (-) True G233677
TU265178 lncRNA upstream 10607 6671352 ~ 6671552 (-) True G233704
TU265183 lncRNA upstream 20734 6681479 ~ 6681940 (-) True G233709
TU265186 lncRNA upstream 23107 6683852 ~ 6684871 (-) True G233712
TU265221 lncRNA upstream 74383 6735128 ~ 6735376 (-) True G233747
TU265244 lncRNA upstream 117367 6778112 ~ 6778311 (-) True G233770
CI01000054_06629482_06641861.mRNA mRNA downstream 18380 6629305 ~ 6642160 (-) False CI01000054_06629482_06641861
CI01000054_06503408_06508723.mRNA mRNA downstream 150472 6503233 ~ 6510068 (-) True CI01000054_06503408_06508723
CI01000054_06469564_06492881.mRNA mRNA downstream 167659 6468852 ~ 6492881 (-) True CI01000054_06469564_06492881
CI01000054_06422150_06433402.mRNA mRNA downstream 226851 6421808 ~ 6433689 (-) True CI01000054_06422150_06433402
CI01000054_06321499_06337371.mRNA mRNA downstream 322773 6321269 ~ 6337767 (-) True CI01000054_06321499_06337371
CI01000054_06830485_06831336.mRNA mRNA upstream 168247 6828992 ~ 6831336 (-) True CI01000054_06830485_06831336
CI01000054_06835747_06861855.mRNA mRNA upstream 173675 6834420 ~ 6863079 (-) True CI01000054_06835747_06861855
CI01000054_06874039_06875193.mRNA mRNA upstream 212575 6873320 ~ 6875309 (-) True CI01000054_06874039_06875193
CI01000054_06895032_06942103.mRNA mRNA upstream 234083 6894828 ~ 6942362 (-) True CI01000054_06895032_06942103
CI01000054_06946694_06947533.mRNA mRNA upstream 284637 6945382 ~ 6947680 (-) False CI01000054_06946694_06947533
TU265088 other downstream 6527 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 1451300 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 1988307 4672197 ~ 4672233 (-) True G231958
TU263225 other downstream 1988307 4672197 ~ 4672233 (-) True G231958
TU262888 other downstream 2677717 3981847 ~ 3982823 (-) True G231645
TU265381 other upstream 504690 7171325 ~ 7171673 (-) True G233891
TU266788 other upstream 2587294 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 2822402 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 2822607 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 2822705 9485215 ~ 9485318 (-) False G235290

Expression Profile