RNA id: TU264278


Basic Information

Item Value
RNA id TU264278
length 204
lncRNA type antisense_over
GC content 0.34
exon number 1
gene id G232883
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6945630 ~ 6945833 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAGATATTTTTGTTGAAATCCGATGGCTCAGTGAGGCCTCCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCAACGAGAATATTTTTGGTGCGCCAAAAAAACAAAATAACGACTTATATAGTGATGGCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264277 lncRNA upstream 34 6944556 ~ 6945596 (+) True G232882
TU264271 lncRNA upstream 28350 6915946 ~ 6917280 (+) True G232876
TU264266 lncRNA upstream 55481 6889921 ~ 6890149 (+) True G232871
TU264232 lncRNA upstream 104567 6839625 ~ 6841063 (+) True G232842
TU264215 lncRNA upstream 113668 6785451 ~ 6831962 (+) True G232827
TU264281 lncRNA downstream 57778 7003611 ~ 7003974 (+) True G232886
TU264241 lncRNA downstream 61278 7007111 ~ 7009223 (+) True G232848
TU264320 lncRNA downstream 121581 7067414 ~ 7067653 (+) True G232914
TU264349 lncRNA downstream 230506 7176339 ~ 7176575 (+) True G232942
TU264351 lncRNA downstream 232415 7178248 ~ 7178633 (+) True G232944
CI01000054_06865381_06869404.mRNA mRNA upstream 75688 6865381 ~ 6869942 (+) True CI01000054_06865381_06869404
CI01000054_06795526_06796596.mRNA mRNA upstream 148986 6795526 ~ 6796644 (+) True CI01000054_06795526_06796596
CI01000054_06789505_06789810.mRNA mRNA upstream 155684 6788362 ~ 6789946 (+) True CI01000054_06789505_06789810
CI01000054_06759472_06761310.mRNA mRNA upstream 184320 6758811 ~ 6761310 (+) True CI01000054_06759472_06761310
CI01000054_06756071_06757443.mRNA mRNA upstream 188116 6755809 ~ 6757514 (+) True CI01000054_06756071_06757443
CI01000054_06962442_06966056.mRNA mRNA downstream 16500 6962333 ~ 6966238 (+) True CI01000054_06962442_06966056
CI01000054_06967494_06972758.mRNA mRNA downstream 21181 6967014 ~ 6972876 (+) True CI01000054_06967494_06972758
CI01000054_06974533_06985526.mRNA mRNA downstream 27519 6973352 ~ 6987037 (+) True CI01000054_06974533_06985526
CI01000054_06990478_06999311.mRNA mRNA downstream 44572 6990405 ~ 6999311 (+) True CI01000054_06990478_06999311
CI01000054_07011099_07011947.mRNA mRNA downstream 65190 7011023 ~ 7012098 (+) True CI01000054_07011099_07011947
TU264264 other upstream 57127 6887912 ~ 6888503 (+) False G232870
TU264265 other upstream 57127 6888114 ~ 6888503 (+) True G232870
TU264006 other upstream 569736 6374850 ~ 6375894 (+) True G232659
TU263932 other upstream 638770 6304307 ~ 6304441 (+) True G232608
TU263881 other upstream 903767 5993660 ~ 6041863 (+) True G232558
TU264435 other downstream 621690 7567523 ~ 7609893 (+) True G233024
TU264744 other downstream 1358766 8304599 ~ 8304949 (+) True G233306
TU264679 other downstream 1360104 8305937 ~ 8306053 (+) True G233242
TU267167 other downstream 3442303 10388136 ~ 10392378 (+) True G235560
TU267998 other downstream 4619143 11564976 ~ 11565121 (+) True G236317

Expression Profile