RNA id: TU265366



Basic Information


Item Value
RNA id TU265366
length 340
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G233881
representative True

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7140012 ~ 7140351 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCATAACAGGAATGATACAACAAGTTTAAACAGACATGTCATTCGTAATAAACTGCAATAGGGTGCATGGTCTTCAAAACGGATATGAATTTACAGCAGGGTCAGTTCATCTTTAGTTGTCAGTTCATTTTCATCTTGAAAAGCCCTGTCCTCAGGAGACACAGCCTACAGAGGAACCCATCTTAACTGTATTCCTGGTGATCACCAGCCTTGTGTGCATCCTGATGCCCCTCTGTAAGATGCTGTATCTCATTATGAAAGGCTGATATGAGTGTGCCAGCTTACACAAATGTAAACAGATGATCCATCTAGCAACTCCAGCCTGCAAAAGCAATCAAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU265323 lncRNA downstream 66842 7072826 ~ 7073170 (-) True G233843
TU265302 lncRNA downstream 91012 7040111 ~ 7049000 (-) True G233822
TU265289 lncRNA downstream 128035 7011064 ~ 7011977 (-) True G233812
TU265096 lncRNA downstream 176604 6960373 ~ 6963408 (-) True G233627
TU265098 lncRNA downstream 194127 6944557 ~ 6945885 (-) True CI01000054_06946694_06947533
TU265386 lncRNA upstream 37489 7177840 ~ 7178439 (-) True G233896
TU265389 lncRNA upstream 41418 7181769 ~ 7182120 (-) True G233899
TU265400 lncRNA upstream 52648 7192999 ~ 7198957 (-) False G233907
TU265401 lncRNA upstream 52648 7192999 ~ 7198957 (-) True G233907
TU265409 lncRNA upstream 65557 7205908 ~ 7206180 (-) True G233915
CI01000054_07130499_07136946.mRNA mRNA downstream 3066 7130315 ~ 7136946 (-) True CI01000054_07130499_07136946
CI01000054_07080724_07095503.mRNA mRNA downstream 44339 7080352 ~ 7095673 (-) True CI01000054_07080724_07095503
CI01000054_07033076_07038297.mRNA mRNA downstream 101715 7031700 ~ 7038297 (-) True CI01000054_07033076_07038297
CI01000054_07026336_07030820.mRNA mRNA downstream 108503 7026147 ~ 7031509 (-) True CI01000054_07026336_07030820
CI01000054_07006908_07009054.mRNA mRNA downstream 130958 7006875 ~ 7009054 (-) True CI01000054_07006908_07009054
CI01000054_07165957_07169539.mRNA mRNA upstream 25405 7165756 ~ 7169539 (-) False CI01000054_07165957_07169539
CI01000054_07228008_07231489.mRNA mRNA upstream 87243 7227594 ~ 7231489 (-) True CI01000054_07228008_07231489
CI01000054_07311700_07314853.mRNA mRNA upstream 171189 7311540 ~ 7317174 (-) True CI01000054_07311700_07314853
CI01000054_07368294_07372480.mRNA mRNA upstream 227741 7368092 ~ 7373799 (-) True CI01000054_07368294_07372480
CI01000054_07385840_07388475.mRNA mRNA upstream 245441 7385792 ~ 7389417 (-) True CI01000054_07385840_07388475
TU265088 other downstream 485999 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 1930772 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 2467779 4672197 ~ 4672233 (-) True G231958
TU263225 other downstream 2467779 4672197 ~ 4672233 (-) True G231958
TU262888 other downstream 3157189 3981847 ~ 3982823 (-) True G231645
TU265381 other upstream 25084 7171325 ~ 7171673 (-) True G233891
TU266788 other upstream 2107688 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 2342796 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 2343001 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 2343099 9485215 ~ 9485318 (-) False G235290

Expression Profile