RNA id: TU264349



Basic Information


Item Value
RNA id TU264349
length 237
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G232942
representative True

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7176339 ~ 7176575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTGACCGTCGCGGGAGGCTTATGGTTTGTCATGTCATGTGTGAGTCAAAACGAGTGTAAGAGATCCCTTTATCCCTCCATCCTCCCCCGACTCCATCTCCTTTCATTACCAATCCCTCTTTTATTCTGGTCTGGATCTCATTTCCAGAAAGCAAGAAGAAAGGAGCTCAAGAGAAAATCGGGCCTTTCGCCGTGTCTCTGCTGTTATTTTTGTTGTCCACCCGCTTCAAAGCCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264320 lncRNA upstream 108686 7067414 ~ 7067653 (+) True G232914
TU264241 lncRNA upstream 167116 7007111 ~ 7009223 (+) True G232848
TU264281 lncRNA upstream 172365 7003611 ~ 7003974 (+) True G232886
TU264278 lncRNA upstream 230506 6945630 ~ 6945833 (+) True G232883
TU264277 lncRNA upstream 230743 6944556 ~ 6945596 (+) True G232882
TU264351 lncRNA downstream 1673 7178248 ~ 7178633 (+) True G232944
TU264355 lncRNA downstream 5327 7181902 ~ 7182155 (+) True G232948
TU264313 lncRNA downstream 41564 7218139 ~ 7219649 (+) True G232907
TU264310 lncRNA downstream 123105 7299680 ~ 7330015 (+) True G232904
TU264445 lncRNA downstream 170228 7346803 ~ 7347003 (+) True G233034
CI01000054_07145831_07153505.mRNA mRNA upstream 21685 7145505 ~ 7154654 (+) True CI01000054_07145831_07153505
CI01000054_07119711_07124720.mRNA mRNA upstream 51569 7119711 ~ 7124770 (+) True CI01000054_07119711_07124720
CI01000054_07040367_07056299.mRNA mRNA upstream 118769 7040367 ~ 7057570 (+) True CI01000054_07040367_07056299
CI01000054_07019424_07021726.mRNA mRNA upstream 154028 7019424 ~ 7022311 (+) True CI01000054_07019424_07021726
CI01000054_07011099_07011947.mRNA mRNA upstream 164241 7011023 ~ 7012098 (+) True CI01000054_07011099_07011947
CI01000054_07189617_07192052.mRNA mRNA downstream 11402 7187977 ~ 7192069 (+) True CI01000054_07189617_07192052
CI01000054_07193147_07196114.mRNA mRNA downstream 16572 7193147 ~ 7196219 (+) True CI01000054_07193147_07196114
CI01000054_07198599_07202146.mRNA mRNA downstream 22024 7198599 ~ 7202293 (+) True CI01000054_07198599_07202146
CI01000054_07209423_07216395.mRNA mRNA downstream 32848 7209423 ~ 7217210 (+) True CI01000054_07209423_07216395
CI01000054_07240475_07241355.mRNA mRNA downstream 63848 7240423 ~ 7242458 (+) True CI01000054_07240475_07241355
TU264264 other upstream 287836 6887912 ~ 6888503 (+) False G232870
TU264265 other upstream 287836 6888114 ~ 6888503 (+) True G232870
TU264006 other upstream 800445 6374850 ~ 6375894 (+) True G232659
TU263932 other upstream 869479 6304307 ~ 6304441 (+) True G232608
TU263881 other upstream 1134476 5993660 ~ 6041863 (+) True G232558
TU264435 other downstream 390948 7567523 ~ 7609893 (+) True G233024
TU264744 other downstream 1128024 8304599 ~ 8304949 (+) True G233306
TU264679 other downstream 1129362 8305937 ~ 8306053 (+) True G233242
TU267167 other downstream 3211561 10388136 ~ 10392378 (+) True G235560
TU267998 other downstream 4388401 11564976 ~ 11565121 (+) True G236317

Expression Profile