RNA id: TU265389


Basic Information

Item Value
RNA id TU265389
length 352
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G233899
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7181769 ~ 7182120 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTCAACGCTGGATTTGCACAAAAGATTAACATGACGGCACACGCTAGTCGATGAGTTGAATCAACTCCACAACAACTACATAAATTTATCCACTAACCGTTCAGAAATGTCCAGTTGCATTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCCGACTCCAGTTTGAACAATGTAAAGCTGACAATCGTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGAAGCGCGAGCTGTTAAATTCATACAATGTGAGTTGTATGGACACAAACTATTTTTAGAAGAATTAAGCATGAAGGTCCAACGCTAACCCTAACCATCAGTGGGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265386 lncRNA downstream 3330 7177840 ~ 7178439 (-) True G233896
TU265366 lncRNA downstream 41418 7140012 ~ 7140351 (-) True G233881
TU265323 lncRNA downstream 108599 7072826 ~ 7073170 (-) True G233843
TU265302 lncRNA downstream 132769 7040111 ~ 7049000 (-) True G233822
TU265289 lncRNA downstream 169792 7011064 ~ 7011977 (-) True G233812
TU265400 lncRNA upstream 10879 7192999 ~ 7198957 (-) False G233907
TU265401 lncRNA upstream 10879 7192999 ~ 7198957 (-) True G233907
TU265409 lncRNA upstream 23788 7205908 ~ 7206180 (-) True G233915
TU265395 lncRNA upstream 37911 7220031 ~ 7226845 (-) True G233904
TU265416 lncRNA upstream 155784 7337904 ~ 7338116 (-) True G233922
CI01000054_07165957_07169539.mRNA mRNA downstream 12230 7165756 ~ 7169539 (-) False CI01000054_07165957_07169539
CI01000054_07130499_07136946.mRNA mRNA downstream 44823 7130315 ~ 7136946 (-) True CI01000054_07130499_07136946
CI01000054_07080724_07095503.mRNA mRNA downstream 86096 7080352 ~ 7095673 (-) True CI01000054_07080724_07095503
CI01000054_07033076_07038297.mRNA mRNA downstream 143472 7031700 ~ 7038297 (-) True CI01000054_07033076_07038297
CI01000054_07026336_07030820.mRNA mRNA downstream 150260 7026147 ~ 7031509 (-) True CI01000054_07026336_07030820
CI01000054_07228008_07231489.mRNA mRNA upstream 45474 7227594 ~ 7231489 (-) True CI01000054_07228008_07231489
CI01000054_07311700_07314853.mRNA mRNA upstream 129420 7311540 ~ 7317174 (-) True CI01000054_07311700_07314853
CI01000054_07368294_07372480.mRNA mRNA upstream 185972 7368092 ~ 7373799 (-) True CI01000054_07368294_07372480
CI01000054_07385840_07388475.mRNA mRNA upstream 203672 7385792 ~ 7389417 (-) True CI01000054_07385840_07388475
CI01000054_07390631_07391977.mRNA mRNA upstream 208466 7390586 ~ 7393103 (-) True CI01000054_07390631_07391977
TU265381 other downstream 10096 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 527756 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 1972529 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 2509536 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 2065919 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 2301027 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 2301232 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 2301330 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 2301364 9485215 ~ 9485318 (-) False G235290

Expression Profile