RNA id: TU265520


Basic Information

Item Value
RNA id TU265520
length 231
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G234024
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7566956 ~ 7567186 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGTCTTCAGTACAGTAGTATTTTATTCATTTGCTTTAACTTTACTAAAGTGACAAACATTACCAATTAACTCAATATATTTCTCACTACCATTCAAAAGTTTGGGGTTGATAATATGTTTAAATGTTTGTGAAAGAAGTCTCTTATGCTCACCAAAGCTGCATTTATTTGATGAGAGTAAAAACAGTAATATTGTGAAATATTATTACAATTTAAAATAACAGTTTTCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265519 lncRNA downstream 431 7566239 ~ 7566525 (-) True G234023
TU265438 lncRNA downstream 57298 7508368 ~ 7509658 (-) True G233942
TU265416 lncRNA downstream 228840 7337904 ~ 7338116 (-) True G233922
TU265395 lncRNA downstream 340111 7220031 ~ 7226845 (-) True G233904
TU265409 lncRNA downstream 360776 7205908 ~ 7206180 (-) True G233915
TU265521 lncRNA upstream 48 7567234 ~ 7567509 (-) True G234025
TU265538 lncRNA upstream 62391 7629577 ~ 7630828 (-) True G234042
TU265535 lncRNA upstream 65816 7633002 ~ 7634751 (-) True G234039
TU265553 lncRNA upstream 70316 7637502 ~ 7637975 (-) True G234057
TU265570 lncRNA upstream 133689 7700875 ~ 7704166 (-) True G234071
CI01000054_07516390_07526784.mRNA mRNA downstream 39507 7516167 ~ 7527449 (-) True CI01000054_07516390_07526784
CI01000054_07418471_07418846.mRNA mRNA downstream 148103 7418167 ~ 7418853 (-) True CI01000054_07418471_07418846
CI01000054_07398765_07399272.mRNA mRNA downstream 166902 7398554 ~ 7400054 (-) True CI01000054_07398765_07399272
CI01000054_07390631_07391977.mRNA mRNA downstream 173853 7390586 ~ 7393103 (-) True CI01000054_07390631_07391977
CI01000054_07385840_07388475.mRNA mRNA downstream 177539 7385792 ~ 7389417 (-) True CI01000054_07385840_07388475
CI01000054_07607425_07611037.mRNA mRNA upstream 39314 7606500 ~ 7611037 (-) True CI01000054_07607425_07611037
CI01000054_07642350_07658894.mRNA mRNA upstream 74614 7641800 ~ 7660515 (-) True CI01000054_07642350_07658894
CI01000054_07712126_07718933.mRNA mRNA upstream 144849 7712035 ~ 7718933 (-) True CI01000054_07712126_07718933
CI01000054_07723457_07725732.mRNA mRNA upstream 156222 7723408 ~ 7725732 (-) True CI01000054_07723457_07725732
CI01000054_07737375_07747797.mRNA mRNA upstream 170068 7737254 ~ 7747797 (-) True CI01000054_07737375_07747797
TU265381 other downstream 395283 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 912943 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 2357716 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 2894723 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 1680853 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 1915961 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 1916166 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 1916264 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 1916298 9485215 ~ 9485318 (-) False G235290

Expression Profile