RNA id: TU265601


Basic Information

Item Value
RNA id TU265601
length 211
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G234101
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7751205 ~ 7751415 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TATGGACAAAGCCAAATGTTGCCTTCAGCCTTCAATGTCTAAAATCAAAGATGATCCATAATGACATGACAAACAGGTAAAATGATTGCTCAATGTGGTATTACCTAAATGAATGGCTATGATGCAAAGCCGGTACTCTCAAGTCATTCCCATATTCCAGATAATATTCCCATAAATACTGATAAAATAGTTGTGATTTCATGAAAACCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265565 lncRNA downstream 14693 7734655 ~ 7736512 (-) True G234066
TU265597 lncRNA downstream 43846 7706096 ~ 7707359 (-) True G234097
TU265570 lncRNA downstream 47039 7700875 ~ 7704166 (-) True G234071
TU265553 lncRNA downstream 113230 7637502 ~ 7637975 (-) True G234057
TU265535 lncRNA downstream 116454 7633002 ~ 7634751 (-) True G234039
TU265621 lncRNA upstream 64816 7816231 ~ 7817329 (-) False G234120
TU265622 lncRNA upstream 64816 7816231 ~ 7818263 (-) True G234120
TU265628 lncRNA upstream 77471 7828886 ~ 7829138 (-) True G234126
TU265630 lncRNA upstream 79698 7831113 ~ 7831355 (-) True G234128
TU265631 lncRNA upstream 81077 7832492 ~ 7832702 (-) True G234129
CI01000054_07737375_07747797.mRNA mRNA downstream 3408 7737254 ~ 7747797 (-) True CI01000054_07737375_07747797
CI01000054_07723457_07725732.mRNA mRNA downstream 25473 7723408 ~ 7725732 (-) True CI01000054_07723457_07725732
CI01000054_07712126_07718933.mRNA mRNA downstream 32272 7712035 ~ 7718933 (-) True CI01000054_07712126_07718933
CI01000054_07642350_07658894.mRNA mRNA downstream 90690 7641800 ~ 7660515 (-) True CI01000054_07642350_07658894
CI01000054_07607425_07611037.mRNA mRNA downstream 140168 7606500 ~ 7611037 (-) True CI01000054_07607425_07611037
CI01000054_07793409_07805739.mRNA mRNA upstream 41784 7793199 ~ 7805739 (-) True CI01000054_07793409_07805739
CI01000054_07874540_07894985.mRNA mRNA upstream 122829 7874244 ~ 7895322 (-) True CI01000054_07874540_07894985
CI01000054_07936687_07947936.mRNA mRNA upstream 185056 7936471 ~ 7947936 (-) True CI01000054_07936687_07947936
CI01000054_07978918_07980431.mRNA mRNA upstream 227074 7978489 ~ 7980475 (-) True CI01000054_07978918_07980431
CI01000054_07985093_07994157.mRNA mRNA upstream 233388 7984803 ~ 7994931 (-) True CI01000054_07985093_07994157
TU265381 other downstream 579532 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 1097192 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 2541965 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 3078972 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 1496624 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 1731732 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 1731937 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 1732035 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 1732069 9485215 ~ 9485318 (-) False G235290

Expression Profile