RNA id: TU265622


Basic Information

Item Value
RNA id TU265622
length 556
lncRNA type antisense_over
GC content 0.52
exon number 4
gene id G234120
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7816231 ~ 7818263 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCCAATAGTGGTTATGTTGCTAACGCGAGTCTTTCCAATCACAGTCTTGGAAAACTGCACCTGGGCTGTGATGTTGGTCACGTCCACCGAGTAATAGTTGTTGTTAGTAATATTCAAAGAGTTAGTGACATTAAGATAGACAATGCGTTTGCTCTGATCATAGGACACGTAGACAGACTTCACTCCCACATAGTTCACATCAATGGAACGTGGGAAAAGGAAGAAAACAGCCAGGCTGGAGAGCAGCAGGCACACAGTGACTGAAGCAGTCACATACAGCTTGGTTCTCCTTGGTCTCAGCCTCTGGTCACTGTATGGGATCAGGGCCACCAGCTGATTTTCTTGGCCTCGCGGGATCCTTCCAGTGCCTTGGCATGTGGGGCAGGTGACGCTGTCTCGGCCAGTGAACTCCACGTAAGGGAACTGAGACACGTCTCCCCCGCTCTTACTGTCCTCCGTCTGCATGGCGCTGTACCCGGGGGACGTGGTTAGGCTGTCCTGACAGTCATCATGACAGGTATGCTTAGGCAGGTGGGAAAGAGCCTTCCCCATTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265601 lncRNA downstream 64816 7751205 ~ 7751415 (-) True G234101
TU265565 lncRNA downstream 79719 7734655 ~ 7736512 (-) True G234066
TU265597 lncRNA downstream 108872 7706096 ~ 7707359 (-) True G234097
TU265570 lncRNA downstream 112065 7700875 ~ 7704166 (-) True G234071
TU265553 lncRNA downstream 178256 7637502 ~ 7637975 (-) True G234057
TU265628 lncRNA upstream 10623 7828886 ~ 7829138 (-) True G234126
TU265630 lncRNA upstream 12850 7831113 ~ 7831355 (-) True G234128
TU265631 lncRNA upstream 14229 7832492 ~ 7832702 (-) True G234129
TU265633 lncRNA upstream 15809 7834072 ~ 7834621 (-) True G234131
TU265564 lncRNA upstream 17800 7836063 ~ 7836840 (-) True G234065
CI01000054_07793409_07805739.mRNA mRNA downstream 10492 7793199 ~ 7805739 (-) True CI01000054_07793409_07805739
CI01000054_07737375_07747797.mRNA mRNA downstream 68434 7737254 ~ 7747797 (-) True CI01000054_07737375_07747797
CI01000054_07723457_07725732.mRNA mRNA downstream 90499 7723408 ~ 7725732 (-) True CI01000054_07723457_07725732
CI01000054_07712126_07718933.mRNA mRNA downstream 97298 7712035 ~ 7718933 (-) True CI01000054_07712126_07718933
CI01000054_07642350_07658894.mRNA mRNA downstream 155716 7641800 ~ 7660515 (-) True CI01000054_07642350_07658894
CI01000054_07874540_07894985.mRNA mRNA upstream 55981 7874244 ~ 7895322 (-) True CI01000054_07874540_07894985
CI01000054_07936687_07947936.mRNA mRNA upstream 118208 7936471 ~ 7947936 (-) True CI01000054_07936687_07947936
CI01000054_07978918_07980431.mRNA mRNA upstream 160226 7978489 ~ 7980475 (-) True CI01000054_07978918_07980431
CI01000054_07985093_07994157.mRNA mRNA upstream 166540 7984803 ~ 7994931 (-) True CI01000054_07985093_07994157
CI01000054_08021522_08026014.mRNA mRNA upstream 202680 8020943 ~ 8026014 (-) True CI01000054_08021522_08026014
TU265381 other downstream 644558 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 1162218 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 2606991 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 3143998 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 1429776 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 1664884 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 1665089 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 1665187 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 1665221 9485215 ~ 9485318 (-) False G235290

Expression Profile