RNA id: TU265628


Basic Information

Item Value
RNA id TU265628
length 253
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G234126
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7828886 ~ 7829138 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CACACACAAACGATCTGCTGCGTGGAGACGCGCGTCTGATGCCTGTGATGGGCAAACTCGCGACTATGACGAGGAAAAAACGATATGCGTGAGGACTCTGTCCTTTTTAGGGTCTCATCTTCCTGTTTTTGGTTCGTTTACATGTCTTTGGTCCGTGTTGCGTAACGATTTTTAGAACTATATCTTTATAGTTATCTTTATAGTTATCGTTCTTGGTGTGAACAGGCCCTTTAGCATGTATTAGCAGACAGTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265622 lncRNA downstream 10623 7816231 ~ 7818263 (-) True G234120
TU265621 lncRNA downstream 11557 7816231 ~ 7817329 (-) False G234120
TU265601 lncRNA downstream 77471 7751205 ~ 7751415 (-) True G234101
TU265565 lncRNA downstream 92374 7734655 ~ 7736512 (-) True G234066
TU265597 lncRNA downstream 121527 7706096 ~ 7707359 (-) True G234097
TU265630 lncRNA upstream 1975 7831113 ~ 7831355 (-) True G234128
TU265631 lncRNA upstream 3354 7832492 ~ 7832702 (-) True G234129
TU265633 lncRNA upstream 4934 7834072 ~ 7834621 (-) True G234131
TU265564 lncRNA upstream 6925 7836063 ~ 7836840 (-) True G234065
TU265669 lncRNA upstream 71400 7900538 ~ 7900780 (-) True G234167
CI01000054_07793409_07805739.mRNA mRNA downstream 23147 7793199 ~ 7805739 (-) True CI01000054_07793409_07805739
CI01000054_07737375_07747797.mRNA mRNA downstream 81089 7737254 ~ 7747797 (-) True CI01000054_07737375_07747797
CI01000054_07723457_07725732.mRNA mRNA downstream 103154 7723408 ~ 7725732 (-) True CI01000054_07723457_07725732
CI01000054_07712126_07718933.mRNA mRNA downstream 109953 7712035 ~ 7718933 (-) True CI01000054_07712126_07718933
CI01000054_07642350_07658894.mRNA mRNA downstream 168371 7641800 ~ 7660515 (-) True CI01000054_07642350_07658894
CI01000054_07874540_07894985.mRNA mRNA upstream 45106 7874244 ~ 7895322 (-) True CI01000054_07874540_07894985
CI01000054_07936687_07947936.mRNA mRNA upstream 107333 7936471 ~ 7947936 (-) True CI01000054_07936687_07947936
CI01000054_07978918_07980431.mRNA mRNA upstream 149351 7978489 ~ 7980475 (-) True CI01000054_07978918_07980431
CI01000054_07985093_07994157.mRNA mRNA upstream 155665 7984803 ~ 7994931 (-) True CI01000054_07985093_07994157
CI01000054_08021522_08026014.mRNA mRNA upstream 191805 8020943 ~ 8026014 (-) True CI01000054_08021522_08026014
TU265381 other downstream 657213 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 1174873 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 2619646 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 3156653 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 1418901 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 1654009 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 1654214 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 1654312 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 1654346 9485215 ~ 9485318 (-) False G235290

Expression Profile