RNA id: TU265669



Basic Information


Item Value
RNA id TU265669
length 243
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G234167
representative True

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7900538 ~ 7900780 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AATAAGTATTGGAAGTGTTTCAGATATTTCAGTATTGATATGTCTATATTTTTTTTGACAACACTACATTGCACTTAGCTTATTATTTCAGATATCTTTGTAAAAGACTACAATTGAAAAATGTATATATATTATATATAAAATTCAACCTGCCAAAGTGGCTAGTAGGAGTGACTGCGTTACACGTCACTGCTGAAATACACCCGCATTTGGCGGGTTGGCGGTTGTTAATGTCAAGCCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU265564 lncRNA downstream 63698 7836063 ~ 7836840 (-) True G234065
TU265633 lncRNA downstream 65917 7834072 ~ 7834621 (-) True G234131
TU265631 lncRNA downstream 67836 7832492 ~ 7832702 (-) True G234129
TU265630 lncRNA downstream 69183 7831113 ~ 7831355 (-) True G234128
TU265628 lncRNA downstream 71400 7828886 ~ 7829138 (-) True G234126
TU265715 lncRNA upstream 130115 8030895 ~ 8031398 (-) True G234207
TU265718 lncRNA upstream 138619 8039399 ~ 8039797 (-) True G234210
TU265730 lncRNA upstream 220398 8121178 ~ 8121700 (-) False G234220
TU265731 lncRNA upstream 220398 8121178 ~ 8121627 (-) False G234220
TU265728 lncRNA upstream 220562 8121342 ~ 8121700 (-) False G234220
CI01000054_07874540_07894985.mRNA mRNA downstream 5216 7874244 ~ 7895322 (-) True CI01000054_07874540_07894985
CI01000054_07793409_07805739.mRNA mRNA downstream 94799 7793199 ~ 7805739 (-) True CI01000054_07793409_07805739
CI01000054_07737375_07747797.mRNA mRNA downstream 152741 7737254 ~ 7747797 (-) True CI01000054_07737375_07747797
CI01000054_07723457_07725732.mRNA mRNA downstream 174806 7723408 ~ 7725732 (-) True CI01000054_07723457_07725732
CI01000054_07712126_07718933.mRNA mRNA downstream 181605 7712035 ~ 7718933 (-) True CI01000054_07712126_07718933
CI01000054_07936687_07947936.mRNA mRNA upstream 35691 7936471 ~ 7947936 (-) True CI01000054_07936687_07947936
CI01000054_07978918_07980431.mRNA mRNA upstream 77709 7978489 ~ 7980475 (-) True CI01000054_07978918_07980431
CI01000054_07985093_07994157.mRNA mRNA upstream 84023 7984803 ~ 7994931 (-) True CI01000054_07985093_07994157
CI01000054_08021522_08026014.mRNA mRNA upstream 120163 8020943 ~ 8026014 (-) True CI01000054_08021522_08026014
CI01000054_08032736_08043035.mRNA mRNA upstream 131605 8032385 ~ 8043316 (-) True CI01000054_08032736_08043035
TU265381 other downstream 728865 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 1246525 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 2691298 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 3228305 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 1347259 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 1582367 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 1582572 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 1582670 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 1582704 9485215 ~ 9485318 (-) False G235290

Expression Profile