RNA id: TU265922


Basic Information

Item Value
RNA id TU265922
length 229
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G234391
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8501301 ~ 8501529 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAACAAAAGCAAGTGGCAACATAAACTCAGTGTTTTTCTCTATACGTAATGTTCTGGGTCACTAACCCATCAGTTTTTGTATCAAGCAGAAAAAAAAATAAACATTCCTCCATTTTGTGGGGAGTCTCAGTCCTATTGCACCTGTTGTAAGTAGGCCAGGGCTCTTCGCAGCAGTCTGTCAGGAGAACCAACACTAACATACAAGAACGAAACAGGTTGCCTATTGTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265919 lncRNA downstream 3171 8497906 ~ 8498130 (-) True G234388
TU265906 lncRNA downstream 10184 8489790 ~ 8491117 (-) True G234375
TU265916 lncRNA downstream 14147 8486944 ~ 8487154 (-) True G234385
TU265914 lncRNA downstream 15400 8485682 ~ 8485901 (-) True G234383
TU265909 lncRNA downstream 24346 8476733 ~ 8476955 (-) True G234378
TU265924 lncRNA upstream 2508 8504037 ~ 8504273 (-) True G234393
TU265936 lncRNA upstream 25325 8526854 ~ 8527113 (-) True G234405
TU265941 lncRNA upstream 41507 8543036 ~ 8543243 (-) True G234410
TU265955 lncRNA upstream 52855 8554384 ~ 8554583 (-) True G234424
TU266460 lncRNA upstream 70907 8572436 ~ 8572678 (-) True G234899
CI01000054_08425960_08439362.mRNA mRNA downstream 61871 8425943 ~ 8439430 (-) True CI01000054_08425960_08439362
CI01000054_08400578_08406066.mRNA mRNA downstream 95235 8400531 ~ 8406066 (-) True CI01000054_08400578_08406066
CI01000054_08375424_08376756.mRNA mRNA downstream 124321 8375071 ~ 8376980 (-) True CI01000054_08375424_08376756
CI01000054_08353876_08358232.mRNA mRNA downstream 143069 8353376 ~ 8358232 (-) True CI01000054_08353876_08358232
CI01000054_08272679_08293481.mRNA mRNA downstream 206136 8272519 ~ 8295165 (-) True CI01000054_08272679_08293481
CI01000054_08574533_08590975.mRNA mRNA upstream 72951 8574480 ~ 8591292 (-) True CI01000054_08574533_08590975
CI01000054_08652832_08667152.mRNA mRNA upstream 151260 8652789 ~ 8668929 (-) False CI01000054_08652832_08667152
CI01000054_08692653_08694052.mRNA mRNA upstream 190610 8692139 ~ 8694052 (-) True CI01000054_08692653_08694052
CI01000054_08710955_08718087.mRNA mRNA upstream 209258 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_08721571_08723333.mRNA mRNA upstream 219479 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
TU265381 other downstream 1329628 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 1847288 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3292061 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 3829068 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 746510 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 981618 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 981823 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 981921 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 981955 9485215 ~ 9485318 (-) False G235290

Expression Profile