RNA id: TU265936


Basic Information

Item Value
RNA id TU265936
length 260
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G234405
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8526854 ~ 8527113 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCTTAACCAAAAACATTGTAAAGCCTAAGTTGATCATAAGTCCATTGGTGGCAATGGTTTTACAATCAACATAGGCTTACAATGCTTTTGGGAAATGCAACCCAGAGCACTACCACAGTGATTACTTTCTTATTAAAGTAATTTGAAAGTTTGTTAGCAGGTCCTCAACCCAAGCACAAGTGCAACAATTCACCACAATGGTAACCCTAAAACTATTAATTAACAGAAACTTTTAAATACCAACATAATAGAACAGTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265924 lncRNA downstream 22581 8504037 ~ 8504273 (-) True G234393
TU265922 lncRNA downstream 25325 8501301 ~ 8501529 (-) True G234391
TU265919 lncRNA downstream 28724 8497906 ~ 8498130 (-) True G234388
TU265906 lncRNA downstream 35737 8489790 ~ 8491117 (-) True G234375
TU265916 lncRNA downstream 39700 8486944 ~ 8487154 (-) True G234385
TU265941 lncRNA upstream 15923 8543036 ~ 8543243 (-) True G234410
TU265955 lncRNA upstream 27271 8554384 ~ 8554583 (-) True G234424
TU266460 lncRNA upstream 45323 8572436 ~ 8572678 (-) True G234899
TU266473 lncRNA upstream 70991 8598104 ~ 8598399 (-) True G234911
TU266488 lncRNA upstream 113428 8640541 ~ 8641175 (-) True G234926
CI01000054_08425960_08439362.mRNA mRNA downstream 87424 8425943 ~ 8439430 (-) True CI01000054_08425960_08439362
CI01000054_08400578_08406066.mRNA mRNA downstream 120788 8400531 ~ 8406066 (-) True CI01000054_08400578_08406066
CI01000054_08375424_08376756.mRNA mRNA downstream 149874 8375071 ~ 8376980 (-) True CI01000054_08375424_08376756
CI01000054_08353876_08358232.mRNA mRNA downstream 168622 8353376 ~ 8358232 (-) True CI01000054_08353876_08358232
CI01000054_08272679_08293481.mRNA mRNA downstream 231689 8272519 ~ 8295165 (-) True CI01000054_08272679_08293481
CI01000054_08574533_08590975.mRNA mRNA upstream 47367 8574480 ~ 8591292 (-) True CI01000054_08574533_08590975
CI01000054_08652832_08667152.mRNA mRNA upstream 125676 8652789 ~ 8668929 (-) False CI01000054_08652832_08667152
CI01000054_08692653_08694052.mRNA mRNA upstream 165026 8692139 ~ 8694052 (-) True CI01000054_08692653_08694052
CI01000054_08710955_08718087.mRNA mRNA upstream 183674 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_08721571_08723333.mRNA mRNA upstream 193895 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
TU265381 other downstream 1355181 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 1872841 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3317614 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 3854621 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 720926 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 956034 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 956239 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 956337 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 956371 9485215 ~ 9485318 (-) False G235290

Expression Profile