RNA id: TU266016


Basic Information

Item Value
RNA id TU266016
length 208
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G234482
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8597970 ~ 8598177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGATTGTTTTTTAGCAGGGTTCATTGCTATGGTAACTTATGCTTCACGGCTAACCTGCTCCGGAGCAGGTTTTATTCTGAGTTAGATCACAAACCCAAACTCGACCAATCAGCTGTGAGTAAAGTGACATGTATCTGATGCAATAAAGCCACTCCCCCTGTATCTCTCGCTCCAAATTAAATCAGTTTATAGTGAAAACATTTTAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265983 lncRNA upstream 24877 8572885 ~ 8573093 (+) True G234452
TU265964 lncRNA upstream 36163 8561597 ~ 8561807 (+) True G234433
TU264777 lncRNA upstream 69796 8527877 ~ 8528174 (+) True G233338
TU264776 lncRNA upstream 70393 8526834 ~ 8527577 (+) True G233337
TU264774 lncRNA upstream 75816 8521718 ~ 8522154 (+) True G233335
TU266024 lncRNA downstream 21765 8619942 ~ 8620228 (+) True G234490
TU266029 lncRNA downstream 38759 8636936 ~ 8637164 (+) True G234495
TU266071 lncRNA downstream 174644 8772821 ~ 8773027 (+) True G234536
TU266076 lncRNA downstream 179984 8778161 ~ 8778376 (+) True G234541
TU266078 lncRNA downstream 181144 8779321 ~ 8779587 (+) True G234543
CI01000054_08485645_08496381.mRNA mRNA upstream 101105 8485428 ~ 8496865 (+) True CI01000054_08485645_08496381
CI01000054_08419492_08424760.mRNA mRNA upstream 173049 8418619 ~ 8424921 (+) True CI01000054_08419492_08424760
CI01000054_08378811_08396034.mRNA mRNA upstream 201748 8378715 ~ 8396222 (+) True CI01000054_08378811_08396034
CI01000054_08377415_08378038.mRNA mRNA upstream 219281 8377125 ~ 8378689 (+) True CI01000054_08377415_08378038
CI01000054_08362528_08374374.mRNA mRNA upstream 223009 8362528 ~ 8374961 (+) True CI01000054_08362528_08374374
CI01000054_08675009_08686170.mRNA mRNA downstream 76832 8675009 ~ 8686679 (+) True CI01000054_08675009_08686170
CI01000054_08695322_08702750.mRNA mRNA downstream 97145 8695322 ~ 8703309 (+) True CI01000054_08695322_08702750
CI01000054_08704697_08709175.mRNA mRNA downstream 106520 8704697 ~ 8709349 (+) True CI01000054_08704697_08709175
CI01000054_08725294_08727378.mRNA mRNA downstream 126987 8725164 ~ 8727830 (+) True CI01000054_08725294_08727378
CI01000054_08771624_08790335.mRNA mRNA downstream 173384 8771561 ~ 8790922 (+) True CI01000054_08771624_08790335
TU264679 other upstream 268382 8305937 ~ 8306053 (+) True G233242
TU264744 other upstream 293021 8304599 ~ 8304949 (+) True G233306
TU264435 other upstream 988077 7567523 ~ 7609893 (+) True G233024
TU264264 other upstream 1709467 6887912 ~ 6888503 (+) False G232870
TU267167 other downstream 1789959 10388136 ~ 10392378 (+) True G235560
TU267998 other downstream 2966799 11564976 ~ 11565121 (+) True G236317
TU268596 other downstream 3034799 11632976 ~ 11634064 (+) True CI01000054_11633235_11635069
TU268594 other downstream 3049802 11647979 ~ 11649025 (+) False CI01000054_11648262_11648786
TU268595 other downstream 3049802 11647979 ~ 11649025 (+) True CI01000054_11648262_11648786

Expression Profile