RNA id: TU266611


Basic Information

Item Value
RNA id TU266611
length 269
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G235049
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8875272 ~ 8875540 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGCTCTTGAAGCTCCACCCTCATCTTGAAAGGGGGCCGGGAGCAGCAACTCATTTGCATTTAAAGGGACACACAAAAACTGTGTTTTTGCTCACCCCCCAAAAGTGGCAATTTTAACATGCTATAGAAAATATCTGTGGGGTATTTTGAGCTAAAACTTCACATACACACTCTAGGGACATCAGAGACTTATTTTACTTCTTGTAAAAAGGGGCATAATAGGTGCCCTTTAATGTTCTGGTGAACTACTGTCTATTTTAATTGCTCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266603 lncRNA downstream 11769 8863172 ~ 8863503 (-) True G235041
TU266588 lncRNA downstream 26638 8848284 ~ 8848634 (-) True G235026
TU266578 lncRNA downstream 36419 8838616 ~ 8838853 (-) True G235016
TU266544 lncRNA downstream 78690 8796189 ~ 8796582 (-) True G234982
TU266531 lncRNA downstream 108598 8766445 ~ 8766674 (-) True G234969
TU266622 lncRNA upstream 18616 8894156 ~ 8894595 (-) True G235060
TU266623 lncRNA upstream 19433 8894973 ~ 8895537 (-) True G235061
TU266627 lncRNA upstream 22348 8897888 ~ 8912476 (-) True G235064
TU266649 lncRNA upstream 98473 8974013 ~ 8974310 (-) True G235084
TU266645 lncRNA upstream 98853 8974393 ~ 8974682 (-) True G235080
CI01000054_08721571_08723333.mRNA mRNA downstream 151190 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_08710955_08718087.mRNA mRNA downstream 157185 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_08692653_08694052.mRNA mRNA downstream 181220 8692139 ~ 8694052 (-) True CI01000054_08692653_08694052
CI01000054_08652832_08667152.mRNA mRNA downstream 206343 8652789 ~ 8668929 (-) False CI01000054_08652832_08667152
CI01000054_08574533_08590975.mRNA mRNA downstream 283980 8574480 ~ 8591292 (-) True CI01000054_08574533_08590975
CI01000054_08937312_08942587.mRNA mRNA upstream 61772 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08953766_08966617.mRNA mRNA upstream 76594 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_09077309_09080163.mRNA mRNA upstream 201291 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_09218869_09223868.mRNA mRNA upstream 343092 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09453616_09482480.mRNA mRNA upstream 576569 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
TU265381 other downstream 1703599 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2221259 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3666032 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 4203039 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 372499 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 607607 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 607812 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 607910 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 607944 9485215 ~ 9485318 (-) False G235290

Expression Profile