RNA id: TU266649


Basic Information

Item Value
RNA id TU266649
length 298
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G235084
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8974013 ~ 8974310 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGACGCTTCAAAAAGTTCATAAAGAGATCGTAAAACTAATCCATATGAATTGAGCGGTTTAGTCCAAATATTAATCTGATGAACAGATTGAATTGAGCTTCCATATAAACCTATGAGGTTCATTCTCATGTGTTATGCAGCATGTTTGAGCTTCCGGAAGAGGTTTGTTCTCACGCGTCAAGCAGGTTCGGTTCACTGATCAATGTTTGTATGTGAATAAAAGCTAAATTAAATCTGTTTTTCATATTAAGTGATCAAGATTCTTCTGAGAATTTGGACTAAACCGCTCAATTCATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266627 lncRNA downstream 61537 8897888 ~ 8912476 (-) True G235064
TU266623 lncRNA downstream 78476 8894973 ~ 8895537 (-) True G235061
TU266622 lncRNA downstream 79418 8894156 ~ 8894595 (-) True G235060
TU266611 lncRNA downstream 98473 8875272 ~ 8875540 (-) True G235049
TU266603 lncRNA downstream 110510 8863172 ~ 8863503 (-) True G235041
TU266645 lncRNA upstream 83 8974393 ~ 8974682 (-) True G235080
TU266661 lncRNA upstream 12791 8987101 ~ 8987407 (-) True G235096
TU266662 lncRNA upstream 13367 8987677 ~ 8987940 (-) True G235097
TU266664 lncRNA upstream 14587 8988897 ~ 8989099 (-) True G235099
TU266701 lncRNA upstream 93268 9067578 ~ 9067907 (-) True G235135
CI01000054_08953766_08966617.mRNA mRNA downstream 7396 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 31426 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 249931 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_08710955_08718087.mRNA mRNA downstream 255926 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_08692653_08694052.mRNA mRNA downstream 279961 8692139 ~ 8694052 (-) True CI01000054_08692653_08694052
CI01000054_09077309_09080163.mRNA mRNA upstream 102521 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_09218869_09223868.mRNA mRNA upstream 244322 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09453616_09482480.mRNA mRNA upstream 477799 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 509502 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 513966 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
TU265381 other downstream 1802340 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2320000 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3764773 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 4301780 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 273729 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 508837 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 509042 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 509140 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 509174 9485215 ~ 9485318 (-) False G235290

Expression Profile