RNA id: TU266664


Basic Information

Item Value
RNA id TU266664
length 203
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G235099
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8988897 ~ 8989099 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCAGACAAAGAGCAGACAGCCTTAGAGCCGAGACACATTAGTCTAAGCTTGGCGAGATAAGGGACATCTGTAGCAGAACGTGCCCGCCTGTTCATTCTGATGACACTGTCTGCTCTGATGGTCCTAAAAAAGAATTATGTGAAATTAAACATTTAATCACCTGCACTGCAGGACTGAAATTATGCAAAAATGTCTTTAAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266662 lncRNA downstream 957 8987677 ~ 8987940 (-) True G235097
TU266661 lncRNA downstream 1490 8987101 ~ 8987407 (-) True G235096
TU266645 lncRNA downstream 14215 8974393 ~ 8974682 (-) True G235080
TU266649 lncRNA downstream 14587 8974013 ~ 8974310 (-) True G235084
TU266627 lncRNA downstream 76421 8897888 ~ 8912476 (-) True G235064
TU266701 lncRNA upstream 78479 9067578 ~ 9067907 (-) True G235135
TU266716 lncRNA upstream 95663 9084762 ~ 9084978 (-) True G235150
TU266756 lncRNA upstream 168382 9157481 ~ 9157736 (-) True G235187
TU266771 lncRNA upstream 208381 9197480 ~ 9197878 (-) True G235202
TU266773 lncRNA upstream 210767 9199866 ~ 9200151 (-) True G235204
CI01000054_08953766_08966617.mRNA mRNA downstream 22280 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 46310 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 264815 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_08710955_08718087.mRNA mRNA downstream 270810 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_08692653_08694052.mRNA mRNA downstream 294845 8692139 ~ 8694052 (-) True CI01000054_08692653_08694052
CI01000054_09077309_09080163.mRNA mRNA upstream 87732 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_09218869_09223868.mRNA mRNA upstream 229533 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09453616_09482480.mRNA mRNA upstream 463010 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 494713 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 499177 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
TU265381 other downstream 1817224 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2334884 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3779657 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 4316664 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 258940 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 494048 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 494253 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 494351 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 494385 9485215 ~ 9485318 (-) False G235290

Expression Profile