RNA id: TU266716


Basic Information

Item Value
RNA id TU266716
length 217
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G235150
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9084762 ~ 9084978 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGTTAAGGGGTTTTCCCATGACTGACAGCGCTAGTCAAAGCATTTGTCAGTTGCGTCTTGTTCAGTGTTCACAACAATTCAGTCTTTTCAATGTAAAAGTCTTCGCTACTGACTGACACACTCATAAAGACAGTCTTTGCTGCCATCTAATGGTGTAATAATGTAACTTCTGTTGCTGTTCACGGTCAGGGACTATTTTTTCCGGCGTAAGGAAGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266701 lncRNA downstream 16855 9067578 ~ 9067907 (-) True G235135
TU266664 lncRNA downstream 95663 8988897 ~ 8989099 (-) True G235099
TU266662 lncRNA downstream 96822 8987677 ~ 8987940 (-) True G235097
TU266661 lncRNA downstream 97355 8987101 ~ 8987407 (-) True G235096
TU266645 lncRNA downstream 110080 8974393 ~ 8974682 (-) True G235080
TU266756 lncRNA upstream 72503 9157481 ~ 9157736 (-) True G235187
TU266771 lncRNA upstream 112502 9197480 ~ 9197878 (-) True G235202
TU266773 lncRNA upstream 114888 9199866 ~ 9200151 (-) True G235204
TU266751 lncRNA upstream 123040 9208018 ~ 9210521 (-) True G235183
TU266754 lncRNA upstream 126197 9211175 ~ 9215878 (-) True G235185
CI01000054_09077309_09080163.mRNA mRNA downstream 3950 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_08953766_08966617.mRNA mRNA downstream 118145 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 142175 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 360680 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_08710955_08718087.mRNA mRNA downstream 366675 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_09218869_09223868.mRNA mRNA upstream 133654 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09453616_09482480.mRNA mRNA upstream 367131 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 398834 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 403298 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
CI01000054_09495785_09497239.mRNA mRNA upstream 410472 9495450 ~ 9497682 (-) True CI01000054_09495785_09497239
TU265381 other downstream 1913089 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2430749 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3875522 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 4412529 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 163061 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 398169 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 398374 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 398472 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 398506 9485215 ~ 9485318 (-) False G235290

Expression Profile