RNA id: TU266773


Basic Information

Item Value
RNA id TU266773
length 286
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G235204
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9199866 ~ 9200151 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCATATTCACATGCTTTAAACACTCACAGAAACACTGCGCATTGTATATAAACAGTAAATACAGCGTTTGAGAGAAAAAAATGTCAAATGCTGACAGAAAACGCTACAATAAGTGAAGAAAAGACCGTTTCATTCTTACCTTTATAGTCCGAAATGTCCATTCAGTATAAACTCGATAGTCCAGTCAGCAATACGAGGATGCGCGATGCTAGAGCTATGCAAACAGGTCGAGTGCTGCGTTTATCCAATCAATGACACTGACACCGCAAATATGCAAATAAGAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266771 lncRNA downstream 1988 9197480 ~ 9197878 (-) True G235202
TU266756 lncRNA downstream 42130 9157481 ~ 9157736 (-) True G235187
TU266716 lncRNA downstream 114888 9084762 ~ 9084978 (-) True G235150
TU266701 lncRNA downstream 131959 9067578 ~ 9067907 (-) True G235135
TU266664 lncRNA downstream 210767 8988897 ~ 8989099 (-) True G235099
TU266751 lncRNA upstream 7867 9208018 ~ 9210521 (-) True G235183
TU266754 lncRNA upstream 11024 9211175 ~ 9215878 (-) True G235185
TU266781 lncRNA upstream 37256 9237407 ~ 9237874 (-) False G235210
TU266779 lncRNA upstream 37311 9237462 ~ 9237874 (-) True G235210
TU266789 lncRNA upstream 48486 9248637 ~ 9248863 (-) True G235217
CI01000054_09077309_09080163.mRNA mRNA downstream 119054 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_08953766_08966617.mRNA mRNA downstream 233249 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 257279 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 475784 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_08710955_08718087.mRNA mRNA downstream 481779 8710787 ~ 8718087 (-) True CI01000054_08710955_08718087
CI01000054_09218869_09223868.mRNA mRNA upstream 18481 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09453616_09482480.mRNA mRNA upstream 251958 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 283661 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 288125 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
CI01000054_09495785_09497239.mRNA mRNA upstream 295299 9495450 ~ 9497682 (-) True CI01000054_09495785_09497239
TU265381 other downstream 2028193 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2545853 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 3990626 5206199 ~ 5209240 (-) True G232274
TU263226 other downstream 4527633 4672197 ~ 4672233 (-) True G231958
TU266788 other upstream 47888 9248039 ~ 9248538 (-) True G235216
TU266868 other upstream 282996 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 283201 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 283299 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 283333 9485215 ~ 9485318 (-) False G235290

Expression Profile