RNA id: TU266791


Basic Information

Item Value
RNA id TU266791
length 236
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G235219
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9249184 ~ 9249419 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTTTTACACATACAAATTCTTAATTACTTTATATGAGTAGAGCTCAGATGACTATGGCTACATTTACACCGCAGTTGAACACAACCCATATATTTTTATTCCCCTTCACGTGTAATACAGATGTTTTTTTTAAATATGATATTTCACACTGAATGTCATATTAAAGTATACTATGAAATCTGTTATGTTGGTTTCATATGGTTATGAAGTGTTTTATACCATTTTCAAGTTTCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266790 lncRNA downstream 66 9248892 ~ 9249118 (-) True G235218
TU266789 lncRNA downstream 321 9248637 ~ 9248863 (-) True G235217
TU266781 lncRNA downstream 11310 9237407 ~ 9237874 (-) False G235210
TU266779 lncRNA downstream 11310 9237462 ~ 9237874 (-) True G235210
TU266754 lncRNA downstream 25938 9211175 ~ 9215878 (-) True G235185
TU266795 lncRNA upstream 11834 9261253 ~ 9261551 (-) True G235223
TU266796 lncRNA upstream 12174 9261593 ~ 9261803 (-) True G235224
TU266803 lncRNA upstream 27720 9277139 ~ 9277358 (-) True G235231
TU266811 lncRNA upstream 43411 9292830 ~ 9293392 (-) True G235239
TU266816 lncRNA upstream 53019 9302438 ~ 9302704 (-) True G235244
CI01000054_09218869_09223868.mRNA mRNA downstream 25065 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09077309_09080163.mRNA mRNA downstream 168372 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_08953766_08966617.mRNA mRNA downstream 282567 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 306597 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 525102 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_09453616_09482480.mRNA mRNA upstream 202690 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 234393 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 238857 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
CI01000054_09495785_09497239.mRNA mRNA upstream 246031 9495450 ~ 9497682 (-) True CI01000054_09495785_09497239
CI01000054_09531778_09544007.mRNA mRNA upstream 282091 9531510 ~ 9544510 (-) True CI01000054_09531778_09544007
TU266788 other downstream 646 9248039 ~ 9248538 (-) True G235216
TU265381 other downstream 2077511 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2595171 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 4039944 5206199 ~ 5209240 (-) True G232274
TU263225 other downstream 4576951 4672197 ~ 4672233 (-) True G231958
TU266868 other upstream 233728 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 233933 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 234031 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 234065 9485215 ~ 9485318 (-) False G235290
TU266869 other upstream 234065 9485215 ~ 9485387 (-) True G235290

Expression Profile