RNA id: TU266816


Basic Information

Item Value
RNA id TU266816
length 267
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G235244
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9302438 ~ 9302704 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTATCATGTCACGTAATCGATCAATTGGTGTTTCAACCGCAGAAAGGCGTCAATAAAACAGCTTGTACAAATGTCACATTTACCGTCACATTTACCTCAGAAAAGCTGTTTAATGTCCAAAAACTCATTAGTCAGCTACAAAAATTAACTTAGAGAGGAGCATTTTGCTAAATATATGCACTATAGGCTATTGCATATTCATTGTATTTGTACTTAAAGTGCTTCAATACTGAATATAAATCCGTTTTATGACAGCCACCATTTGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU266811 lncRNA downstream 9046 9292830 ~ 9293392 (-) True G235239
TU266803 lncRNA downstream 25080 9277139 ~ 9277358 (-) True G235231
TU266796 lncRNA downstream 40635 9261593 ~ 9261803 (-) True G235224
TU266795 lncRNA downstream 40887 9261253 ~ 9261551 (-) True G235223
TU266791 lncRNA downstream 53019 9249184 ~ 9249419 (-) True G235219
TU266822 lncRNA upstream 13828 9316532 ~ 9316798 (-) True G235250
TU266878 lncRNA upstream 97657 9400361 ~ 9400566 (-) True G235298
TU266891 lncRNA upstream 134765 9437469 ~ 9441851 (-) True G235308
TU266934 lncRNA upstream 224144 9526848 ~ 9527267 (-) True G235350
TU266952 lncRNA upstream 254060 9556764 ~ 9559903 (-) True G235368
CI01000054_09218869_09223868.mRNA mRNA downstream 78319 9218632 ~ 9224119 (-) False CI01000054_09218869_09223868
CI01000054_09077309_09080163.mRNA mRNA downstream 221626 9076831 ~ 9080812 (-) True CI01000054_09077309_09080163
CI01000054_08953766_08966617.mRNA mRNA downstream 335821 8952134 ~ 8966617 (-) True CI01000054_08953766_08966617
CI01000054_08937312_08942587.mRNA mRNA downstream 359851 8937312 ~ 8942587 (-) True CI01000054_08937312_08942587
CI01000054_08721571_08723333.mRNA mRNA downstream 578356 8721008 ~ 8724082 (-) False CI01000054_08721571_08723333
CI01000054_09453616_09482480.mRNA mRNA upstream 149405 9452109 ~ 9482723 (-) True CI01000054_09453616_09482480
CI01000054_09483912_09484282.mRNA mRNA upstream 181108 9483812 ~ 9484282 (-) False CI01000054_09483912_09484282
CI01000054_09488559_09488870.mRNA mRNA upstream 185572 9488276 ~ 9488870 (-) True CI01000054_09488559_09488870
CI01000054_09495785_09497239.mRNA mRNA upstream 192746 9495450 ~ 9497682 (-) True CI01000054_09495785_09497239
CI01000054_09531778_09544007.mRNA mRNA upstream 228806 9531510 ~ 9544510 (-) True CI01000054_09531778_09544007
TU266788 other downstream 53900 9248039 ~ 9248538 (-) True G235216
TU265381 other downstream 2130765 7171325 ~ 7171673 (-) True G233891
TU265088 other downstream 2648425 6649149 ~ 6654013 (-) True G233619
TU263564 other downstream 4093198 5206199 ~ 5209240 (-) True G232274
TU263225 other downstream 4630205 4672197 ~ 4672233 (-) True G231958
TU266868 other upstream 180443 9485215 ~ 9485318 (-) False G235290
TU266867 other upstream 180648 9485215 ~ 9485318 (-) False G235290
TU266866 other upstream 180746 9485215 ~ 9485318 (-) False G235290
TU266865 other upstream 180780 9485215 ~ 9485318 (-) False G235290
TU266869 other upstream 180780 9485215 ~ 9485387 (-) True G235290

Expression Profile