RNA id: TU267387


Basic Information

Item Value
RNA id TU267387
length 264
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G235750
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9853261 ~ 9853524 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTTCAACAGATTCATTGAAAAGATCCGACTCAAAAGAAAGATTCATTCACAGATCTGGCGTCATTACGCACTAGTACGTGAAGAACAAAACCGGTTACATTGTCATCACTGACCCAATGACCTTCACTCTGGAGATTTGAGGCAGTCCGTGTGAACTATTAAAGTCTATTAATAGGCGTGCGCGTTTGTTACAAAGTAGACCAGTCGTAAAAAAAATAAAAACAACATGTAGGGAGAGTGAAGTGAAATATGATAAAAGCCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU267340 lncRNA downstream 24092 9821113 ~ 9829169 (-) True G235706
TU267374 lncRNA downstream 57266 9793671 ~ 9795995 (-) True G235737
TU267263 lncRNA downstream 156002 9696958 ~ 9697259 (-) True G235651
TU267261 lncRNA downstream 175641 9677283 ~ 9677620 (-) True G235649
TU267260 lncRNA downstream 176466 9676474 ~ 9676795 (-) True G235648
TU267398 lncRNA upstream 38256 9891780 ~ 9892046 (-) True G235761
TU267401 lncRNA upstream 75628 9929152 ~ 9936746 (-) True G235764
TU267411 lncRNA upstream 92600 9946124 ~ 9946394 (-) True G235772
TU267431 lncRNA upstream 122256 9975780 ~ 9976208 (-) True G235790
TU267470 lncRNA upstream 180629 10034153 ~ 10038735 (-) True G235828
CI01000054_09841097_09848347.mRNA mRNA downstream 4369 9841014 ~ 9848892 (-) True CI01000054_09841097_09848347
CI01000054_09831831_09832148.mRNA mRNA downstream 21113 9831758 ~ 9832148 (-) True CI01000054_09831831_09832148
CI01000054_09812111_09813425.mRNA mRNA downstream 39760 9811858 ~ 9813501 (-) True CI01000054_09812111_09813425
CI01000054_09686420_09705911.mRNA mRNA downstream 147350 9686047 ~ 9705911 (-) True CI01000054_09686420_09705911
CI01000054_09650064_09651286.mRNA mRNA downstream 201975 9649807 ~ 9651286 (-) True CI01000054_09650064_09651286
CI01000054_09864693_09866871.mRNA mRNA upstream 10759 9864283 ~ 9867035 (-) False CI01000054_09864693_09866871
CI01000054_09914091_09916621.mRNA mRNA upstream 59846 9913370 ~ 9916621 (-) True CI01000054_09914091_09916621
CI01000054_10082299_10083956.mRNA mRNA upstream 228389 10081913 ~ 10084102 (-) True CI01000054_10082299_10083956
CI01000054_10124266_10128452.mRNA mRNA upstream 270530 10124054 ~ 10128452 (-) True CI01000054_10124266_10128452
CI01000054_10162998_10168490.mRNA mRNA upstream 309443 10162967 ~ 10169049 (-) True CI01000054_10162998_10168490
TU266869 other downstream 367874 9485215 ~ 9485387 (-) True G235290
TU266868 other downstream 367943 9485215 ~ 9485318 (-) False G235290
TU267307 other upstream 9797 9863321 ~ 9867058 (-) False CI01000054_09864693_09866871
TU267309 other upstream 9797 9863321 ~ 9867212 (-) False CI01000054_09864693_09866871
TU267308 other upstream 9874 9863398 ~ 9867058 (-) True CI01000054_09864693_09866871
TU268158 other upstream 950347 10803871 ~ 10816186 (-) True G236458
TU268159 other upstream 950347 10803871 ~ 10815565 (-) False G236458

Expression Profile