Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00018897 |
| length | 1139 |
| lncRNA type | antisense_over |
| GC content | 0.51 |
| exon number | 5 |
| gene id | XLOC_008353 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 12059240 ~ 12362508 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0017119 | Golgi transport complex | cellular_component |
| GO:0099023 | vesicle tethering complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018896 | lncRNA | upstream | 49841 | 12004803 ~ 12009399 (+) | True | XLOC_008351 |
| TCONS_00018894 | lncRNA | upstream | 72606 | 11983170 ~ 11986634 (+) | False | XLOC_008350 |
| TCONS_00018895 | lncRNA | upstream | 72606 | 11983833 ~ 11986634 (+) | False | XLOC_008350 |
| TCONS_00016747 | lncRNA | upstream | 72606 | 11984034 ~ 11986634 (+) | False | XLOC_008350 |
| TCONS_00016750 | lncRNA | upstream | 72614 | 11985781 ~ 11986626 (+) | True | XLOC_008350 |
| TCONS_00018903 | lncRNA | downstream | 390069 | 12507799 ~ 12525596 (+) | False | XLOC_008356 |
| TCONS_00018904 | lncRNA | downstream | 390116 | 12507846 ~ 12521524 (+) | False | XLOC_008356 |
| TCONS_00018905 | lncRNA | downstream | 390116 | 12507846 ~ 12522794 (+) | True | XLOC_008356 |
| TCONS_00018906 | lncRNA | downstream | 502377 | 12620107 ~ 12621628 (+) | True | XLOC_008357 |
| TCONS_00018907 | lncRNA | downstream | 883463 | 13001193 ~ 13091234 (+) | False | XLOC_008358 |
| TCONS_00016751 | mRNA | upstream | 4494 | 12030367 ~ 12054746 (+) | True | XLOC_008352 |
| TCONS_00016740 | mRNA | upstream | 150158 | 11883804 ~ 11909082 (+) | True | XLOC_008349 |
| TCONS_00016739 | mRNA | upstream | 183420 | 11840311 ~ 11875820 (+) | True | XLOC_008348 |
| TCONS_00016738 | mRNA | upstream | 188710 | 11825366 ~ 11870530 (+) | False | XLOC_008348 |
| TCONS_00016737 | mRNA | upstream | 238691 | 11814969 ~ 11820549 (+) | True | XLOC_008347 |
| TCONS_00016752 | mRNA | downstream | 260157 | 12377887 ~ 12388434 (+) | True | XLOC_008354 |
| TCONS_00016753 | mRNA | downstream | 311476 | 12429206 ~ 12451734 (+) | False | XLOC_008355 |
| TCONS_00016754 | mRNA | downstream | 318245 | 12435975 ~ 12459335 (+) | False | XLOC_008355 |
| TCONS_00016755 | mRNA | downstream | 318490 | 12436220 ~ 12454729 (+) | True | XLOC_008355 |
| TCONS_00016759 | mRNA | downstream | 1867149 | 13984879 ~ 13986761 (+) | True | XLOC_008362 |
| TCONS_00016731 | other | upstream | 493731 | 11565391 ~ 11565509 (+) | True | XLOC_008343 |
| TCONS_00016719 | other | upstream | 2163254 | 9895858 ~ 9895986 (+) | True | XLOC_008335 |
| TCONS_00016712 | other | upstream | 2747762 | 9303809 ~ 9311478 (+) | True | XLOC_008326 |
| TCONS_00016703 | other | upstream | 3020076 | 9039050 ~ 9039164 (+) | True | XLOC_008321 |
| TCONS_00016700 | other | upstream | 3327374 | 8731752 ~ 8731866 (+) | True | XLOC_008318 |
| TCONS_00016757 | other | downstream | 1407144 | 13524874 ~ 13524988 (+) | True | XLOC_008360 |
| TCONS_00016758 | other | downstream | 1839992 | 13957722 ~ 13957850 (+) | True | XLOC_008361 |
| TCONS_00016791 | other | downstream | 3276512 | 15394242 ~ 15401640 (+) | True | XLOC_008381 |
| TCONS_00016809 | other | downstream | 4401237 | 16518967 ~ 16519083 (+) | True | XLOC_008398 |
| TCONS_00016813 | other | downstream | 4712032 | 16829762 ~ 16829876 (+) | True | XLOC_008400 |
