Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000055_02608904_02621376.mRNA |
| length | 1130 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 8 |
| gene id | CI01000055_02608904_02621376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 2608904 ~ 2621462 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005635 | nuclear envelope | cellular_component |
| id | description |
|---|---|
| K07928 | RAB40; Ras-related protein Rab-40 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU271376 | lncRNA | upstream | 1368 | 2606642 ~ 2607536 (+) | True | CI01000055_02601849_02607123 |
| TU271375 | lncRNA | upstream | 1469 | 2606642 ~ 2607435 (+) | False | CI01000055_02601849_02607123 |
| TU271374 | lncRNA | upstream | 1563 | 2606642 ~ 2607341 (+) | False | CI01000055_02601849_02607123 |
| TU271380 | lncRNA | upstream | 44380 | 2563630 ~ 2564524 (+) | True | G239185 |
| TU271369 | lncRNA | upstream | 48728 | 2558972 ~ 2560176 (+) | True | G239180 |
| TU271432 | lncRNA | downstream | 95655 | 2717117 ~ 2717394 (+) | True | G239228 |
| TU271443 | lncRNA | downstream | 123618 | 2745080 ~ 2745816 (+) | False | G239235 |
| TU271440 | lncRNA | downstream | 123877 | 2745339 ~ 2745665 (+) | True | G239235 |
| TU271447 | lncRNA | downstream | 126777 | 2748239 ~ 2748474 (+) | True | G239237 |
| TU271448 | lncRNA | downstream | 127095 | 2748557 ~ 2748883 (+) | True | G239238 |
| CI01000055_02601849_02607123.mRNA | mRNA | upstream | 1596 | 2600730 ~ 2607308 (+) | False | CI01000055_02601849_02607123 |
| CI01000055_02542526_02542861.mRNA | mRNA | upstream | 65994 | 2542216 ~ 2542910 (+) | False | CI01000055_02542526_02542861 |
| CI01000055_02425304_02429638.mRNA | mRNA | upstream | 179185 | 2425304 ~ 2429719 (+) | True | CI01000055_02425304_02429638 |
| CI01000055_02420414_02422942.mRNA | mRNA | upstream | 185208 | 2420414 ~ 2423696 (+) | True | CI01000055_02420414_02422942 |
| CI01000055_02152005_02168439.mRNA | mRNA | upstream | 440445 | 2151391 ~ 2168459 (+) | True | CI01000055_02152005_02168439 |
| CI01000055_02646852_02680018.mRNA | mRNA | downstream | 22888 | 2644350 ~ 2680037 (+) | True | CI01000055_02646852_02680018 |
| CI01000055_02729512_02734190.mRNA | mRNA | downstream | 108050 | 2729512 ~ 2734772 (+) | True | CI01000055_02729512_02734190 |
| CI01000055_02760466_02767918.mRNA | mRNA | downstream | 138649 | 2760111 ~ 2767934 (+) | True | CI01000055_02760466_02767918 |
| CI01000055_02808336_02822398.mRNA | mRNA | downstream | 186874 | 2808336 ~ 2822782 (+) | True | CI01000055_02808336_02822398 |
| CI01000055_02852816_02861925.mRNA | mRNA | downstream | 231354 | 2852816 ~ 2862645 (+) | False | CI01000055_02852816_02861925 |
| TU271353 | other | upstream | 64786 | 2541122 ~ 2541235 (+) | True | G239173 |
| TU271351 | other | upstream | 64786 | 2541201 ~ 2541235 (+) | True | G239173 |
| TU270647 | other | upstream | 939660 | 1668410 ~ 1669244 (+) | True | G238534 |
| TU269823 | other | upstream | 2188972 | 418925 ~ 419932 (+) | True | G237840 |
| TU269631 | other | upstream | 2587742 | 20902 ~ 21162 (+) | True | G237680 |
| TU272036 | other | downstream | 1540788 | 4162250 ~ 4213402 (+) | True | G239761 |
| TU272029 | other | downstream | 1632748 | 4254210 ~ 4255092 (+) | True | G239755 |
| TU272088 | other | downstream | 1642565 | 4264027 ~ 4264066 (+) | True | G239802 |
| TU272472 | other | downstream | 2544030 | 5165492 ~ 5166647 (+) | True | CI01000055_05163240_05166231 |
| TU272428 | other | downstream | 2915056 | 5536518 ~ 5543812 (+) | True | G240099 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| bowfin (Amia calva) | AMCG00013151 | True | 837 | mRNA | 0.53 | 6 | CM030125.1 | 22319662 ~ 22367010 (-) |
