RNA id: CI01000055_03616564_03618430.mRNA


Basic Information

Item Value
RNA id CI01000055_03616564_03618430.mRNA
length 540
RNA type mRNA
GC content 0.43
exon number 5
gene id CI01000055_03616564_03618430
representative False

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3616555 ~ 3618430 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAATCATGGAAGCATCGCTTCTTTGTGCTCGCAAAGACAAACAACAGCAGTCATGAGCTAAAATACTACAAAACCACTGAGAGAAACAAACTTATAAAATCCATAGATGTTTCCACCATCACAATGCTGCATGTGCATCCTGAATCACATTCAGTCTTTGAATGGATCTGCAAAACCTTCAAGTGCTCTCCATCCTCTGTGCTCTTCATGAAAACAGAAAATCCAGCAAACAAGGTCCAAAGAGAATATTTCTTCATTGGAGACACCAGTGAGGAGGTGGATAGATGGTTCAATGCTTTATCCAGGGTTTCGAAGAATATCAAATCTGAGGCACAAACTGAACCTCAGATTATGCCAGAATCCAACTCTAGTGACCAAAACCCCTGTGACACTGAAGAGACTGAAGTTGATAGTCTACCCCCACTGCCTCCAAGGGGAAAGTCAGCATCTGAAGGTGTTACCACTCAGCAGGGTCAATGTAGCCAACCACCCAAGAACAGCCCATCTGCAACAGAGGTATCACATAGTTAAACCAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU273365 lncRNA downstream 50713 3563813 ~ 3565842 (-) True G240884
TU273366 lncRNA downstream 121691 3494200 ~ 3494864 (-) True G240885
TU273361 lncRNA downstream 163053 3453287 ~ 3453502 (-) True G240881
TU273358 lncRNA downstream 165701 3450642 ~ 3450854 (-) True G240878
TU273357 lncRNA downstream 166021 3450285 ~ 3450534 (-) True G240877
TU273446 lncRNA upstream 41086 3659516 ~ 3665515 (-) True G240949
TU273447 lncRNA upstream 47876 3666306 ~ 3666603 (-) True G240950
TU273453 lncRNA upstream 58805 3677235 ~ 3680938 (-) True G240954
TU273459 lncRNA upstream 67632 3686062 ~ 3686286 (-) True G240959
TU273463 lncRNA upstream 74161 3692591 ~ 3692839 (-) True G240963
CI01000055_03585354_03604468.mRNA mRNA downstream 12087 3584080 ~ 3604468 (-) True CI01000055_03585354_03604468
CI01000055_03574677_03575939.mRNA mRNA downstream 40616 3573336 ~ 3575939 (-) True CI01000055_03574677_03575939
CI01000055_03518013_03528878.mRNA mRNA downstream 87677 3517554 ~ 3528878 (-) True CI01000055_03518013_03528878
CI01000055_03498800_03512565.mRNA mRNA downstream 103990 3497883 ~ 3512565 (-) True CI01000055_03498800_03512565
CI01000055_03480523_03482073.mRNA mRNA downstream 134334 3480211 ~ 3482221 (-) True CI01000055_03480523_03482073
CI01000055_03626294_03640787.mRNA mRNA upstream 7760 3626190 ~ 3640787 (-) True CI01000055_03626294_03640787
CI01000055_03643253_03646423.mRNA mRNA upstream 24744 3643174 ~ 3646423 (-) True CI01000055_03643253_03646423
CI01000055_03658872_03663877.mRNA mRNA upstream 39873 3658303 ~ 3664039 (-) True CI01000055_03658872_03663877
CI01000055_03766205_03773588.mRNA mRNA upstream 146864 3765294 ~ 3773588 (-) True CI01000055_03766205_03773588
CI01000055_03783468_03784414.mRNA mRNA upstream 164255 3782685 ~ 3784513 (-) True CI01000055_03783468_03784414
TU273296 other downstream 398961 3216174 ~ 3217594 (-) True G240825
TU273192 other downstream 867203 2748835 ~ 2749352 (-) True G240723
TU271063 other downstream 1297501 2311659 ~ 2319054 (-) True G238932
TU270993 other downstream 2322032 1281108 ~ 1294523 (-) True G238867
TU270579 other downstream 2351747 1263634 ~ 1264808 (-) True G238481
TU273475 other upstream 99221 3717651 ~ 3733995 (-) True G240975
TU273507 other upstream 292872 3926718 ~ 3936754 (-) True G241003
TU273619 other upstream 1125276 4779684 ~ 4780268 (-) True G241104
TU273990 other upstream 1715855 5334285 ~ 5352177 (-) True G241440
TU274106 other upstream 1942913 5561343 ~ 5565783 (-) True G241542

Expression Profile