Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000055_03717618_03733174.mRNA |
| length | 5480 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 19 |
| gene id | CI01000055_03717618_03733174 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 3716053 ~ 3733597 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0031012 | extracellular matrix | cellular_component |
| id | description |
|---|---|
| K04659 | THBS2S; thrombospondin 2/3/4/5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU271841 | lncRNA | upstream | 8049 | 3707467 ~ 3708004 (+) | True | G239599 |
| TU271840 | lncRNA | upstream | 10828 | 3705024 ~ 3705225 (+) | True | G239598 |
| TU271801 | lncRNA | upstream | 91048 | 3624783 ~ 3625005 (+) | True | G239565 |
| TU271782 | lncRNA | upstream | 134943 | 3580901 ~ 3581110 (+) | True | G239546 |
| TU271771 | lncRNA | upstream | 197923 | 3509117 ~ 3518130 (+) | True | G239535 |
| TU271899 | lncRNA | downstream | 136135 | 3869732 ~ 3925859 (+) | True | G239646 |
| TU271891 | lncRNA | downstream | 146769 | 3880366 ~ 3965963 (+) | False | G239643 |
| TU271893 | lncRNA | downstream | 146769 | 3880366 ~ 3965963 (+) | False | G239643 |
| TU271895 | lncRNA | downstream | 202945 | 3936542 ~ 3965963 (+) | True | G239643 |
| TU272021 | lncRNA | downstream | 392930 | 4126527 ~ 4127026 (+) | True | G239748 |
| CI01000055_03667192_03685378.mRNA | mRNA | upstream | 30160 | 3666736 ~ 3685893 (+) | True | CI01000055_03667192_03685378 |
| CI01000055_03653282_03656353.mRNA | mRNA | upstream | 59630 | 3653208 ~ 3656423 (+) | True | CI01000055_03653282_03656353 |
| CI01000055_03604945_03612832.mRNA | mRNA | upstream | 102913 | 3604945 ~ 3613140 (+) | True | CI01000055_03604945_03612832 |
| CI01000055_03539420_03563869.mRNA | mRNA | upstream | 152158 | 3539148 ~ 3563895 (+) | True | CI01000055_03539420_03563869 |
| CI01000055_03532706_03537026.mRNA | mRNA | upstream | 178859 | 3531374 ~ 3537194 (+) | True | CI01000055_03532706_03537026 |
| CI01000055_03745295_03748598.mRNA | mRNA | downstream | 9888 | 3743485 ~ 3749226 (+) | True | CI01000055_03745295_03748598 |
| CI01000055_03752947_03764493.mRNA | mRNA | downstream | 19350 | 3752947 ~ 3765045 (+) | True | CI01000055_03752947_03764493 |
| CI01000055_03795753_03805149.mRNA | mRNA | downstream | 62106 | 3795703 ~ 3806779 (+) | True | CI01000055_03795753_03805149 |
| CI01000055_03903278_03905608.mRNA | mRNA | downstream | 169493 | 3903090 ~ 3905734 (+) | True | CI01000055_03903278_03905608 |
| CI01000055_03909546_03911972.mRNA | mRNA | downstream | 175270 | 3908867 ~ 3912179 (+) | True | CI01000055_03909546_03911972 |
| TU271353 | other | upstream | 1171935 | 2541122 ~ 2541235 (+) | True | G239173 |
| TU271351 | other | upstream | 1171935 | 2541201 ~ 2541235 (+) | True | G239173 |
| TU270647 | other | upstream | 2046809 | 1668410 ~ 1669244 (+) | True | G238534 |
| TU269823 | other | upstream | 3296121 | 418925 ~ 419932 (+) | True | G237840 |
| TU269631 | other | upstream | 3694891 | 20902 ~ 21162 (+) | True | G237680 |
| TU272036 | other | downstream | 428653 | 4162250 ~ 4213402 (+) | True | G239761 |
| TU272029 | other | downstream | 520613 | 4254210 ~ 4255092 (+) | True | G239755 |
| TU272088 | other | downstream | 530430 | 4264027 ~ 4264066 (+) | True | G239802 |
| TU272472 | other | downstream | 1431895 | 5165492 ~ 5166647 (+) | True | CI01000055_05163240_05166231 |
| TU272428 | other | downstream | 1802921 | 5536518 ~ 5543812 (+) | True | G240099 |
