Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU272717 |
| length | 1525 |
| lncRNA type | read_through |
| GC content | 0.32 |
| exon number | 1 |
| gene id | CI01000055_06238643_06245138 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 6238643 ~ 6245317 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | description |
|---|---|
| K15685 | CBLL1; E3 ubiquitin-protein ligase Hakai |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU272852 | lncRNA | upstream | 37503 | 6200138 ~ 6200482 (+) | True | G240453 |
| TU272849 | lncRNA | upstream | 74314 | 6163361 ~ 6163671 (+) | True | G240450 |
| TU272843 | lncRNA | upstream | 101845 | 6135903 ~ 6136140 (+) | True | G240444 |
| TU272830 | lncRNA | upstream | 114303 | 6120554 ~ 6123682 (+) | True | G240433 |
| TU272829 | lncRNA | upstream | 118201 | 6119544 ~ 6119784 (+) | True | G240432 |
| TU272744 | lncRNA | downstream | 91164 | 6331331 ~ 6333548 (+) | True | G240358 |
| TU272888 | lncRNA | downstream | 159826 | 6399993 ~ 6400807 (+) | True | G240472 |
| TU272890 | lncRNA | downstream | 161134 | 6401301 ~ 6401914 (+) | True | G240473 |
| TU272900 | lncRNA | downstream | 172687 | 6412854 ~ 6413389 (+) | True | G240479 |
| TU272902 | lncRNA | downstream | 174025 | 6414192 ~ 6414489 (+) | True | G240481 |
| CI01000055_06191356_06221464.mRNA | mRNA | upstream | 16163 | 6191175 ~ 6221822 (+) | False | CI01000055_06191356_06221464 |
| CI01000055_06177831_06186773.mRNA | mRNA | upstream | 51212 | 6177831 ~ 6186773 (+) | True | CI01000055_06177831_06186773 |
| CI01000055_06164325_06174472.mRNA | mRNA | upstream | 63222 | 6164325 ~ 6174763 (+) | False | CI01000055_06164325_06174472 |
| CI01000055_06154806_06161718.mRNA | mRNA | upstream | 75909 | 6154806 ~ 6162076 (+) | True | CI01000055_06154806_06161718 |
| CI01000055_06148933_06151962.mRNA | mRNA | upstream | 85780 | 6148684 ~ 6152205 (+) | True | CI01000055_06148933_06151962 |
| CI01000055_06247679_06298687.mRNA | mRNA | downstream | 7512 | 6247679 ~ 6299580 (+) | True | CI01000055_06247679_06298687 |
| CI01000055_06310117_06334586.mRNA | mRNA | downstream | 69950 | 6310117 ~ 6334586 (+) | False | CI01000055_06310117_06334586 |
| CI01000055_06349198_06350625.mRNA | mRNA | downstream | 108244 | 6348411 ~ 6351516 (+) | True | CI01000055_06349198_06350625 |
| CI01000055_06357064_06359067.mRNA | mRNA | downstream | 116257 | 6356424 ~ 6359067 (+) | True | CI01000055_06357064_06359067 |
| CI01000055_06377893_06381162.mRNA | mRNA | downstream | 137587 | 6377754 ~ 6381215 (+) | True | CI01000055_06377893_06381162 |
| TU272730 | other | upstream | 44085 | 6163860 ~ 6164011 (+) | True | G240344 |
| TU272705 | other | upstream | 149226 | 6086825 ~ 6086887 (+) | True | G240319 |
| TU272586 | other | upstream | 620394 | 5614632 ~ 5617591 (+) | True | CI01000055_05614889_05616453 |
| TU272585 | other | upstream | 621632 | 5614378 ~ 5616353 (+) | False | CI01000055_05614889_05616453 |
| TU272428 | other | upstream | 694173 | 5536518 ~ 5543812 (+) | True | G240099 |
| TU272693 | other | downstream | 94157 | 6334892 ~ 6341165 (+) | True | G240308 |
