RNA id: TCONS_00016774


Basic Information

Item Value
RNA id TCONS_00016774
length 2760
RNA type mRNA
GC content 0.36
exon number 1
gene id XLOC_008372
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14826966 ~ 14853579 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGAATACAGAACTTGGATAGCCACAGTAGGCTATGTTGATTGCATATTGTAATTAGCCTGCTGAGGAATGTCAATTATGCCACTTATTAGTTTTTTCCTGTTTCTTTTCTGTCAGATGTGTGCAGAATGTCCACTCATAACAGCAGTGGCGATGAGCAGATGCAGCTGATTCAGGTGGACCCCGTGCGGAGGAACATCTCACTGGCGTTGACGCAGGTCATTGTGTGGCCCTTCATCTATCTCATCTTCCTCATGCTCCTCATATTCTCCAAAAAGGAGACTTTCACAACTGAGACTCGCTATATACTGTTCGGACACTCTTTGTTGGTCGACCTGATATTTATTTGCCTGACAGACCTTGTGGTGCTTTTGTCATACAACCTTGTTTTATTACCTCTGCATTTCTGTATCCCCATCTGCATGCTAATGGAGGCTGTCACAGCATGTGCTCCACTGACCATCATAGCCATGTGTGTGGAGCGTTATGTGGCCATTTGCCTGCCTCTTAGACACCATGCCATCTCCACCTCCAGAAGAGCCTTCATGGTGATTTTAATGATCTGGATCGTGAGCTCCATAAACCCGTTTATTGACATGTTCATTCTCGTCAGCACAGCCTCTCATGAATACTTGACTCAGCTCACACACTGCCACTATGAGATTATGATCCCTGAAAAGATCCGCGTGTTTGCCAGGGGGTTGTTGTACATTGTGGGGCTCgtggttattttaataattgagatattttgctatgtaaTGATTTATCTCGCTGCTCGTGCTGCATCTGGTGACAATAAGAAATCTGCATCGAAAGGGCAGCGCACTATTTCCCTGCACATACTTCAGCTGTTTTTATGCACTGCAGAGGTGATGTGCCCTTACATTGAGTCTGTGGTCATGCAGTATGATATTCAGTCATATCTGACTGTACGATTTATAAACTTCCTGGCATTCAGCATCACTTCTAGAGCGGTCAGTCCTCTTGTGTATGGATTTAGAGATGAGAAATTTTATACAGCGATGGTTTACTTTATCAGAtgcaaaaacaacacaatctctCAATTACATGAATAACtcaaaaataagtaaaagaaaaatGTGTAACATCTTTACATTCATATgagatttttgtttaatattcgATGCGCACTAACATGTAAATTAGCAGGTTTGAGTATTTTGTGGAtaacaagtgttttctgtttatttatggttgtgaactgcattatgggagcttgatctctgctctgttgacttttggtGTTGAAAATTTGTCAATTCAgcaaagttacttttattgacatttgtacTTTGAAATACTATTATGTACCCTGTatttgatcaattagtcctgacagcatatgtttttaggtcattacttattaaactaagttaataatgttctaacttaattttataagttatgcaagcagttttaagtcagtttcaCATAGTagaagttcaatggactcaatgattcaacttaaaaaattaaagcaactaggattttttcagtgtataagaaataatacagagagaaataagtctgaaaagaaacaaaaaatgtacagacattgaaatattatatatataatattataattttttttcaaattaagttaacttaaaagttgttgaaagaagGTCCAAatcaatgtaattttaaataaatggagggaaaaacatgaatcacacaaTACAGAAtagcatttatatttatatggttTTTGCAGTGTGgatgtttttcttgttttgttataCTTAAAAGTAATTGATAAGTGCTCCATTATGATTATCCATAACACTCTATCATATCCAGAGTTTGTATTTGTCCGGTGTCCTGACATTTACGCATCAGGTTATGCTACCACTGTATTtgacactgtatttgaatggttctgggGTTGGAGACTTGtggttagggattaggtaggttagggtgatATTCCTACAGCTTCATATCAAACTACTCCACATTAAATTTTACAccggtagcaaaatctgatgggtagcatattgcattattaaaatgtgCATCCTACTTTTAGAATGGAAGGTAGAACAATCTGACAAGGTATGGACACTAAGTGCTTTGGAAGGTGCCTCTCGCATTCAGTGTATTGTTTAGTAGCGACCTCTCTTGGTCGGATTGAGCATTATTTGTGGAAGAAAGACTTTTCCTTTACATTATATTGACTTAAAAGATGTGTAAAAAAGATTTATTGATGATAAGAATCGCATGACATGAAAGATTATTAAAGATTACACATTGCATTGTCAAATCGAGTTCATTTATGCAGTACTGCTCTGCAAAAATCACCTTAAAGTTTAACACATAAATGTTTGCACAACATAAAATCATCAGTTTAAACATTACAAATCTATTAATGCACCCTAAACATGTAGTATGTAGTTACAGTCAAACAGTCTAATCATTGAACAagagcaattatttaaataatattaaagaaatgtCGTCAATCAAATGCCATAATGTCTGCTGTGTGGCCTTTGCATTCCACTCAGGCATGATGCAATCATGACTTCAAAACAGCCTTTACTGTGCATGATTTCTCTGTATTCCTGTGACTTGGACCCTGAGCTCTATAAACCCTTTGTTTACATGTACATTCTTATACTGCTGCCTAAGATAAGCACTTGAGGGGATTCATCACTATTGTTGTCTACTTTTTTCTTTTCACAAGTGTTTAAAAGTGCTTTATGTAACACGTTTTTCTCCACCATTAAACATTTACCACA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-44 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDART00000162866

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018910 lncRNA upstream 600891 14249389 ~ 14249929 (+) True XLOC_008368
TCONS_00016763 lncRNA upstream 708828 14141055 ~ 14141992 (+) False XLOC_008365
TCONS_00016760 lncRNA upstream 797354 14045121 ~ 14053466 (+) True XLOC_008363
TCONS_00016756 lncRNA upstream 1341452 13421514 ~ 13509368 (+) False XLOC_008359
TCONS_00016776 lncRNA downstream 1310 14854889 ~ 14855766 (+) False XLOC_008373
TCONS_00016777 lncRNA downstream 2617 14856196 ~ 14857945 (+) False XLOC_008373
TCONS_00018912 lncRNA downstream 494063 15347642 ~ 15351457 (+) False XLOC_008379
TCONS_00018911 lncRNA downstream 494063 15347642 ~ 15351457 (+) True XLOC_008379
TCONS_00016790 lncRNA downstream 537322 15390901 ~ 15394658 (+) False XLOC_008381
TCONS_00016772 mRNA upstream 21902 14826966 ~ 14828918 (+) False XLOC_008372
TCONS_00016771 mRNA upstream 183725 14642641 ~ 14667095 (+) True XLOC_008371
TCONS_00016770 mRNA upstream 250524 14592624 ~ 14600296 (+) True XLOC_008370
TCONS_00016769 mRNA upstream 430256 14378829 ~ 14420564 (+) True XLOC_008369
TCONS_00016768 mRNA upstream 644755 14202114 ~ 14206065 (+) True XLOC_008367
TCONS_00016775 mRNA downstream 1087 14854666 ~ 14858189 (+) False XLOC_008373
TCONS_00016778 mRNA downstream 2728 14856307 ~ 14857464 (+) True XLOC_008373
TCONS_00016779 mRNA downstream 7756 14861335 ~ 14964241 (+) True XLOC_008374
TCONS_00016780 mRNA downstream 320032 15173611 ~ 15218956 (+) True XLOC_008375
TCONS_00016781 mRNA downstream 379276 15232855 ~ 15237211 (+) False XLOC_008376
TCONS_00016758 other upstream 892970 13957722 ~ 13957850 (+) True XLOC_008361
TCONS_00016757 other upstream 1325832 13524874 ~ 13524988 (+) True XLOC_008360
TCONS_00016731 other upstream 3285311 11565391 ~ 11565509 (+) True XLOC_008343
TCONS_00016719 other upstream 4954834 9895858 ~ 9895986 (+) True XLOC_008335
TCONS_00016712 other upstream 5539342 9303809 ~ 9311478 (+) True XLOC_008326
TCONS_00016791 other downstream 540663 15394242 ~ 15401640 (+) True XLOC_008381
TCONS_00016809 other downstream 1665388 16518967 ~ 16519083 (+) True XLOC_008398
TCONS_00016813 other downstream 1976183 16829762 ~ 16829876 (+) True XLOC_008400
TCONS_00016824 other downstream 2246898 17100477 ~ 17101668 (+) False XLOC_008406
TCONS_00016835 other downstream 2520210 17373789 ~ 17373915 (+) True XLOC_008411

Expression Profile

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